Rhizobium sp. UGM030330-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. UGM030330-04 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates its motility in various environments. This species possesses a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in various biological processes. The accession number for Rhizobium sp. UGM030330-04 is QKML00000000.1, which provides a reference point for genetic and genomic studies. As a member of the genus Rhizobium, this bacterium is known for its symbiotic relationships with leguminous plants, where it forms root nodules and facilitates nitrogen fixation. This ecological role is significant, as it enhances soil fertility and supports plant growth, particularly in nitrogen-poor environments. The presence of flagella suggests that Rhizobium sp. UGM030330-04 is capable of active movement, which may aid in its colonization of plant roots and enhance its symbiotic efficiency. Overall, the traits of this bacterium highlight its potential importance in agricultural practices, particularly in sustainable farming systems that rely on natural nitrogen fixation to reduce the need for synthetic fertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. UGM030330-04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. UGM030330-04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. UGM030330-04 N434DRAFT_scaffold00057.57, whole

Gene Summary

Adenine Count

1065538 bp

Thymine Count

1070407 bp

Guanine Count

1594978 bp

Cytosine Count

1587642 bp

Genome Length

5318565 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-carboxy-cis,cis-muconate cycloisomeraseN434_03875Not AvailableNegative4089060 - 409012137498.0
protocatechuate 3,4-dioxygenase alpha subunitN434_03876Not AvailableNegative4090135 - 409075522890.0
protocatechuate 3,4-dioxygenase beta subunitN434_03877Not AvailableNegative4090758 - 409149827755.3
4-carboxymuconolactone decarboxylaseN434_03878Not AvailableNegative4091495 - 409192915692.5
3-oxoadipate enol-lactonaseN434_03879Not AvailableNegative4091933 - 409273028474.0
lysr family transcriptional regulatorN434_03880Not AvailablePositive4092825 - 409376633704.1
p-hydroxybenzoate 3-monooxygenaseN434_03881Not AvailableNegative4093981 - 409515343614.8
arac family transcriptional regulatorN434_03882Not AvailablePositive4095271 - 409620034623.0
iclr family transcriptional regulatorN434_03883Not AvailableNegative4096170 - 409693127430.7
3-oxoadipate coa-transferase alpha subunitN434_03884Not AvailablePositive4097071 - 409777824873.0

Displaying genes 3861 – 3870 of 4966 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.