Rhizobium sp. UGM030330-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. UGM030330-04 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates its motility in various environments. This species possesses a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in various biological processes. The accession number for Rhizobium sp. UGM030330-04 is QKML00000000.1, which provides a reference point for genetic and genomic studies. As a member of the genus Rhizobium, this bacterium is known for its symbiotic relationships with leguminous plants, where it forms root nodules and facilitates nitrogen fixation. This ecological role is significant, as it enhances soil fertility and supports plant growth, particularly in nitrogen-poor environments. The presence of flagella suggests that Rhizobium sp. UGM030330-04 is capable of active movement, which may aid in its colonization of plant roots and enhance its symbiotic efficiency. Overall, the traits of this bacterium highlight its potential importance in agricultural practices, particularly in sustainable farming systems that rely on natural nitrogen fixation to reduce the need for synthetic fertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. UGM030330-04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. UGM030330-04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. UGM030330-04 N434DRAFT_scaffold00057.57, whole

Gene Summary

Adenine Count

1065538 bp

Thymine Count

1070407 bp

Guanine Count

1594978 bp

Cytosine Count

1587642 bp

Genome Length

5318565 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rnase phN434_00315Not AvailablePositive329996 - 33071225962.1
xtp/ditp diphosphohydrolaseN434_00316Not AvailablePositive330730 - 33137423082.9
anaerobic coproporphyrinogen iii oxidaseN434_00317Not AvailablePositive331380 - 33257944359.6
chromosomal replication initiator protein dnaaN434_00318Not AvailableNegative332651 - 33411454479.6
ssu ribosomal protein s20pN434_00319Not AvailableNegative334985 - 3352519452.56
short chain enoyl-coa hydrataseN434_00320Not AvailableNegative335446 - 33621927627.5
dna-(apurinic or apyrimidinic site) lyase /formamidopyrimidine-dna glycosylaseN434_00321Not AvailableNegative336268 - 33716432681.1
demethylmenaquinone methyltransferase /2-octaprenyl-6-methoxy-1,4-benzoquinone methylaseN434_00322Not AvailablePositive337308 - 33808428668.2
2-octaprenylphenol hydroxylaseN434_00323Not AvailablePositive338122 - 33969658179.8
sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily)N434_00324Not AvailablePositive340110 - 34102433925.4

Displaying genes 361 – 370 of 4966 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.