Rhizobium sp. UGM030330-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. UGM030330-04 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates its motility in various environments. This species possesses a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in various biological processes. The accession number for Rhizobium sp. UGM030330-04 is QKML00000000.1, which provides a reference point for genetic and genomic studies. As a member of the genus Rhizobium, this bacterium is known for its symbiotic relationships with leguminous plants, where it forms root nodules and facilitates nitrogen fixation. This ecological role is significant, as it enhances soil fertility and supports plant growth, particularly in nitrogen-poor environments. The presence of flagella suggests that Rhizobium sp. UGM030330-04 is capable of active movement, which may aid in its colonization of plant roots and enhance its symbiotic efficiency. Overall, the traits of this bacterium highlight its potential importance in agricultural practices, particularly in sustainable farming systems that rely on natural nitrogen fixation to reduce the need for synthetic fertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. UGM030330-04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. UGM030330-04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. UGM030330-04 N434DRAFT_scaffold00057.57, whole

Gene Summary

Adenine Count

1065538 bp

Thymine Count

1070407 bp

Guanine Count

1594978 bp

Cytosine Count

1587642 bp

Genome Length

5318565 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad+ kinaseN434_03664Not AvailablePositive3862932 - 386370528480.8
hypothetical proteinN434_03665Not AvailablePositive3863727 - 386422718190.7
nicotinamidase-related amidaseN434_03666Not AvailableNegative3864333 - 386480316954.6
peptide chain release factor 2 (brf-2)N434_03667Not AvailableNegative3864876 - 386590438094.2
penicillin-binding protein 1aN434_03668Not AvailableNegative3866107 - 386855488489.6
n-acetylmuramoyl-l-alanine amidaseN434_03669Not AvailableNegative3868893 - 387016145284.8
rnase eN434_03670Not AvailablePositive3870799 - 3873714107086.0
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)N434_03671Not AvailableNegative3873805 - 387450924695.4
heme-degrading monooxygenase hmoaN434_03672Not AvailableNegative3874650 - 387501513681.1
nipsnap proteinN434_03673Not AvailableNegative3875012 - 387533812257.4

Displaying genes 3651 – 3660 of 4966 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.