Pseudomonas sp. CC120222-01a

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. CC120222-01a is characterized by possessing a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and gene expression. This trait is often associated with certain environmental adaptations, enabling the bacterium to thrive in diverse ecological niches. The accession number for this strain is QEQQ00000000.1, which serves as a unique identifier for it in genomic databases, allowing for further study and comparison with other strains of Pseudomonas. This species belongs to the Pseudomonadaceae family, known for its metabolic versatility and ability to degrade a wide range of organic compounds. Pseudomonas species are typically found in soil, water, and plant environments, where they play significant roles in nutrient cycling and organic matter decomposition. The ecological insights gained from studying Pseudomonas sp. CC120222-01a can contribute to our understanding of microbial interactions in these habitats, particularly regarding their role in bioremediation processes. The ability of Pseudomonas to metabolize various substrates makes it a candidate for applications in environmental cleanup, particularly in contaminated sites. Overall, the characteristics of Pseudomonas sp. CC120222-01a highlight its potential importance in both ecological dynamics and biotechnological applications, emphasizing the relevance of further research on this strain and its relatives within the Pseudomonas genus.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. CC120222-01a
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. CC120222-01a
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. CC120222-01a N430DRAFT_scaffold00062.62, whole

Gene Summary

Adenine Count

1160457 bp

Thymine Count

1157332 bp

Guanine Count

1943184 bp

Cytosine Count

1956531 bp

Genome Length

6217874 bp

Protein-coding Genes

5508 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc-type spermidine/putrescine transport system permease subunit iN430_00631Not AvailablePositive659742 - 66066234469.4
abc-type spermidine/putrescine transport system permease subunit iiN430_00632Not AvailablePositive660659 - 66155232291.4
rnd family efflux transporter mfp subunitN430_00633Not AvailablePositive661985 - 66307338268.8
rnd family efflux transporter mfp subunitN430_00634Not AvailablePositive663070 - 66413438064.1
multidrug efflux pump subunit acrbN430_00635Not AvailablePositive664131 - 667196112852.0
hypothetical proteinN430_00636Not AvailablePositive667435 - 6676176751.06
sulfate transport system substrate-binding proteinN430_00637Not AvailablePositive667668 - 66867536709.4
sulfate transport system permease proteinN430_00638Not AvailablePositive668881 - 66969929371.2
sulfate transport system permease proteinN430_00639Not AvailablePositive669710 - 67058231535.1
sulfate transport system atp-binding proteinN430_00640Not AvailablePositive670586 - 67157536988.2

Displaying genes 691 – 700 of 5672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.