Pseudomonas sp. CC120222-01a

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. CC120222-01a is characterized by possessing a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and gene expression. This trait is often associated with certain environmental adaptations, enabling the bacterium to thrive in diverse ecological niches. The accession number for this strain is QEQQ00000000.1, which serves as a unique identifier for it in genomic databases, allowing for further study and comparison with other strains of Pseudomonas. This species belongs to the Pseudomonadaceae family, known for its metabolic versatility and ability to degrade a wide range of organic compounds. Pseudomonas species are typically found in soil, water, and plant environments, where they play significant roles in nutrient cycling and organic matter decomposition. The ecological insights gained from studying Pseudomonas sp. CC120222-01a can contribute to our understanding of microbial interactions in these habitats, particularly regarding their role in bioremediation processes. The ability of Pseudomonas to metabolize various substrates makes it a candidate for applications in environmental cleanup, particularly in contaminated sites. Overall, the characteristics of Pseudomonas sp. CC120222-01a highlight its potential importance in both ecological dynamics and biotechnological applications, emphasizing the relevance of further research on this strain and its relatives within the Pseudomonas genus.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. CC120222-01a
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. CC120222-01a
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. CC120222-01a N430DRAFT_scaffold00062.62, whole

Gene Summary

Adenine Count

1160457 bp

Thymine Count

1157332 bp

Guanine Count

1943184 bp

Cytosine Count

1956531 bp

Genome Length

6217874 bp

Protein-coding Genes

5508 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinN430_00516Not AvailableNegative532343 - 53267212185.7
peptidase m15-like proteinN430_00517Not AvailableNegative532743 - 53317415766.1
glutaredoxin-like protein duf836N430_00518Not AvailableNegative533283 - 5335228885.75
ammonium transporterN430_00519Not AvailableNegative533599 - 53480742313.2
elab/yqjd/duf883 family membrane-anchored ribosome-binding proteinN430_00520Not AvailablePositive535128 - 53544211387.5
putative membrane protein yqjeN430_00521Not AvailablePositive535452 - 53582613276.5
hypothetical proteinN430_00522Not AvailablePositive535823 - 53615212211.3
dgtpaseN430_00523Not AvailablePositive536256 - 53758749929.5
luxr family two component transcriptional regulatorN430_00524Not AvailablePositive537868 - 53848823104.4
two-component system sensor histidine kinase evgsN430_00525Not AvailablePositive538497 - 542096132007.0

Displaying genes 581 – 590 of 5672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.