Pseudomonas sp. CC120222-01a

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. CC120222-01a is characterized by possessing a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and gene expression. This trait is often associated with certain environmental adaptations, enabling the bacterium to thrive in diverse ecological niches. The accession number for this strain is QEQQ00000000.1, which serves as a unique identifier for it in genomic databases, allowing for further study and comparison with other strains of Pseudomonas. This species belongs to the Pseudomonadaceae family, known for its metabolic versatility and ability to degrade a wide range of organic compounds. Pseudomonas species are typically found in soil, water, and plant environments, where they play significant roles in nutrient cycling and organic matter decomposition. The ecological insights gained from studying Pseudomonas sp. CC120222-01a can contribute to our understanding of microbial interactions in these habitats, particularly regarding their role in bioremediation processes. The ability of Pseudomonas to metabolize various substrates makes it a candidate for applications in environmental cleanup, particularly in contaminated sites. Overall, the characteristics of Pseudomonas sp. CC120222-01a highlight its potential importance in both ecological dynamics and biotechnological applications, emphasizing the relevance of further research on this strain and its relatives within the Pseudomonas genus.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. CC120222-01a
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. CC120222-01a
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. CC120222-01a N430DRAFT_scaffold00062.62, whole

Gene Summary

Adenine Count

1160457 bp

Thymine Count

1157332 bp

Guanine Count

1943184 bp

Cytosine Count

1956531 bp

Genome Length

6217874 bp

Protein-coding Genes

5508 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5,10-methylenetetrahydrofolate dehydrogenase (nadp+)N430_00071Not AvailablePositive63716 - 6462732235.5
n-methylglutamate dehydrogenase subunit a precursorN430_00072Not AvailablePositive64609 - 6585045263.5
n-methylglutamate dehydrogenase subunit bN430_00073Not AvailablePositive65863 - 6616811526.4
n-methylglutamate dehydrogenase subunit cN430_00074Not AvailablePositive66165 - 69068105516.0
Ncrna_class:antisense_rnaNot AvailableNot AvailablePositive67147 - 67236Not Available
Ncrna_class:otherNot AvailableNot AvailablePositive67643 - 67822Not Available
sarcosine oxidase gamma subunit family proteinN430_00075Not AvailablePositive69072 - 6967721801.8
lysr family transcriptional regulatorN430_00076Not AvailableNegative69793 - 7073435049.4
acetyl esterase/lipaseN430_00077Not AvailablePositive70824 - 7184336358.5
putative zn-binding protein involved in type vi secretionN430_00078Not AvailableNegative72258 - 7332237959.1

Displaying genes 171 – 180 of 5672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.