Rhodobacteraceae bacterium HIMB11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

Rhodobacteraceae bacterium HIMB11 is a member of the family Rhodobacteraceae, known for its ecological significance in various aquatic environments. This bacterium possesses a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation to its environment. The genome of Rhodobacteraceae bacterium HIMB11 is accessible through the accession AVDB00000000.1, which provides a resource for researchers interested in studying its genetic makeup and potential metabolic capabilities. The Rhodobacteraceae family is characterized by its members' versatile metabolic pathways, often involving phototrophy and the ability to utilize diverse organic compounds. This adaptability can play a crucial role in nutrient cycling within its ecosystem, particularly in marine and freshwater habitats where it can contribute to the degradation of organic materials. The ecological insight into Rhodobacteraceae bacterium HIMB11 suggests that it may be involved in significant biochemical processes that support primary production and nutrient turnover in its environment. By participating in the decomposition of organic matter, this bacterium could help maintain the health of aquatic ecosystems, making it an important player in the microbial community dynamics. The understanding of such bacteria is essential for appreciating their role in environmental sustainability and the functioning of aquatic ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnorthwest Arabian Gulf
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacteraceae bacterium HIMB11 HIMB11_contig8.34, whole genome

Gene Summary

Adenine Count

772412 bp

Thymine Count

785258 bp

Guanine Count

780587 bp

Cytosine Count

760490 bp

Genome Length

3098747 bp

Protein-coding Genes

3183 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine abc transporter atp-binding subunitHIMB11_00066Not AvailableNegative66833 - 6793340719.1
pantothenate synthetaseHIMB11_00067Not AvailablePositive68136 - 6898130975.2
ketopantoate hydroxymethyltransferaseHIMB11_00068Not AvailablePositive68990 - 6980829352.6
adenosylmethionine-8-amino-7-oxononanoate aminotransferaseHIMB11_00069Not AvailableNegative69955 - 7134951020.8
transcriptional regulatorHIMB11_00070Not AvailableNegative71448 - 7210123732.6
spermidine/putrescine-binding periplasmic proteinHIMB11_00071Not AvailablePositive72273 - 7335839586.1
spermidine/putrescine abc transporter atp-binding subunitHIMB11_00072Not AvailablePositive73426 - 7455941993.5
abc-type spermidine/putrescine transport system, permease component iHIMB11_00073Not AvailablePositive74562 - 7545233570.0
abc-type spermidine/putrescine transport system, permease component iiHIMB11_00074Not AvailablePositive75449 - 7626429481.7
glycine/d-amino acid oxidase, deaminatingHIMB11_00075Not AvailablePositive76265 - 7759348826.2

Displaying genes 71 – 80 of 3233 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.