Rickettsia amblyommatis str. Darkwater

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia amblyommatis str. Darkwater is a species of bacteria characterized by the presence of flagella, which are structures that facilitate motility. This organism has a singular replicon, indicating a streamlined genetic organization that is typical for many members of the Rickettsia genus. The specific genetic information for Rickettsia amblyommatis str. Darkwater is cataloged under the accession LAOH00000000.1. As a member of the Rickettsia genus, this species is likely to be associated with arthropods, particularly ticks, as many Rickettsia are known to have complex life cycles involving vectors. The presence of flagella may suggest an adaptation that aids in its survival and transmission within its ecological niche. Understanding the specific traits of Rickettsia amblyommatis str. Darkwater can provide insights into its ecological relationships and potential roles in disease ecology, particularly regarding its interactions with tick populations and vertebrate hosts. The motility conferred by flagella may enhance its ability to colonize different environments or evade host immune responses, contributing to its persistence in nature. Further studies are warranted to explore its ecological significance and potential impact on public health, especially in regions where it may be transmitted by tick bites.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia amblyommatis
StrainDarkwater

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia amblyommatis str. Darkwater craDarkwater.contig.67_1,

Gene Summary

Adenine Count

484770 bp

Thymine Count

482250 bp

Guanine Count

237200 bp

Cytosine Count

234154 bp

Genome Length

1438374 bp

Protein-coding Genes

1949 genes

Non-Coding Genes

34 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hd domain proteinRAMDARK_0629Not AvailablePositive683335 - 68404227593.5
sugar (and other) transporter family proteinRAMDARK_0630Not AvailableNegative683993 - 68530949920.8
type i secretion membrane fusion, hlyd family proteinRAMDARK_0631Not AvailableNegative685455 - 68656141696.9
type i secretion system atpase family proteinRAMDARK_0632Not AvailableNegative686562 - 68825761865.4
aspartate-semialdehyde dehydrogenaseRAMDARK_0633Not AvailableNegative688271 - 68928437162.5
hit domain proteinRAMDARK_0634Not AvailableNegative689277 - 68963613448.2
hypothetical proteinRAMDARK_0635Not AvailableNegative689819 - 69017213645.0
atp-dependent protease hslvu, peptidase subunitRAMDARK_0636Not AvailablePositive690421 - 69096919749.1
atp-dependent protease hslvu, atpase subunitRAMDARK_0637Not AvailablePositive690966 - 69231849734.4
magnesium chelatase, subunit chli family proteinRAMDARK_0638Not AvailablePositive692525 - 69341531086.3

Displaying genes 961 – 970 of 1983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.