Rickettsia amblyommatis str. Darkwater

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia amblyommatis str. Darkwater is a species of bacteria characterized by the presence of flagella, which are structures that facilitate motility. This organism has a singular replicon, indicating a streamlined genetic organization that is typical for many members of the Rickettsia genus. The specific genetic information for Rickettsia amblyommatis str. Darkwater is cataloged under the accession LAOH00000000.1. As a member of the Rickettsia genus, this species is likely to be associated with arthropods, particularly ticks, as many Rickettsia are known to have complex life cycles involving vectors. The presence of flagella may suggest an adaptation that aids in its survival and transmission within its ecological niche. Understanding the specific traits of Rickettsia amblyommatis str. Darkwater can provide insights into its ecological relationships and potential roles in disease ecology, particularly regarding its interactions with tick populations and vertebrate hosts. The motility conferred by flagella may enhance its ability to colonize different environments or evade host immune responses, contributing to its persistence in nature. Further studies are warranted to explore its ecological significance and potential impact on public health, especially in regions where it may be transmitted by tick bites.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia amblyommatis
StrainDarkwater

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia amblyommatis str. Darkwater craDarkwater.contig.67_1,

Gene Summary

Adenine Count

484770 bp

Thymine Count

482250 bp

Guanine Count

237200 bp

Cytosine Count

234154 bp

Genome Length

1438374 bp

Protein-coding Genes

1949 genes

Non-Coding Genes

34 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pd-(d/e)xk nuclease transposase family proteinRAMDARK_0859Not AvailablePositive852137 - 85246912638.5
ribonucleotide reductase, small chain family proteinRAMDARK_0860Not AvailablePositive852626 - 85360938305.8
pentapeptide repeats family proteinRAMDARK_0861Not AvailablePositive853786 - 856635107837.0
rpe1 domain proteinRAMDARK_0862Not AvailableNegative856855 - 8569543922.66
lipopolysaccharide-assembly, lptc-related family proteinRAMDARK_0863Not AvailableNegative856923 - 85745020184.0
sugar isomerase, kpsf/gutq family proteinRAMDARK_0864Not AvailableNegative857525 - 85848435194.1
hypothetical proteinRAMDARK_0865Not AvailableNegative858489 - 8586656774.19
polyribonucleotide nucleotidyltransferaseRAMDARK_0866Not AvailableNegative858684 - 86082878531.6
ribosomal protein s15RAMDARK_0867Not AvailableNegative861077 - 86135210609.0
trna pseudouridine(55) synthaseRAMDARK_0868Not AvailableNegative861388 - 86242538751.7

Displaying genes 1191 – 1200 of 1983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.