Helicobacter macacae MIT 99-5501

microaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter macacae MIT 99-5501 is a microaerophilic bacterium, meaning it requires reduced levels of oxygen for growth, which is characteristic of many members of the Helicobacter genus. This bacterium has been identified with a single replicon, indicating a straightforward genomic structure that may facilitate its adaptability and replication under specific environmental conditions. The strain is cataloged under the accession AZJI00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications in microbiological studies. The microaerophilic nature of H. macacae suggests that it may inhabit environments where oxygen levels are lower than atmospheric levels, possibly within the gastrointestinal tracts of certain host organisms. The ecological significance of Helicobacter macacae may lie in its interactions within the microbiome of primates, particularly in its potential roles in digestion or pathogen resistance. Understanding the characteristics of this bacterium can provide insights into the broader ecological dynamics of Helicobacter species and their adaptations to specific niches.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter macacae
StrainMIT 99-5501

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter macacae MIT 99-5501
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter macacae MIT 99-5501


Gene Summary

Adenine Count

702297 bp

Thymine Count

698835 bp

Guanine Count

480726 bp

Cytosine Count

476899 bp

Genome Length

2358757 bp

Protein-coding Genes

1946 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseHMPREF2086_00078Not AvailableNegative83842 - 8542858034.1
aspartate ammonia-lyaseHMPREF2086_00079Not AvailableNegative85438 - 8685952285.0
hypothetical proteinHMPREF2086_00080Not AvailablePositive87335 - 8886154718.6
hypothetical proteinHMPREF2086_00081Not AvailableNegative89149 - 9040246269.5
thiamine-phosphate pyrophosphorylaseHMPREF2086_00082Not AvailableNegative90542 - 9121623871.9
hypothetical proteinHMPREF2086_00083Not AvailableNegative91336 - 9185118950.7
diaminopimelate epimeraseHMPREF2086_00084Not AvailablePositive92041 - 9309038046.4
hypothetical proteinHMPREF2086_00085Not AvailablePositive93328 - 9394223211.6
hypothetical proteinHMPREF2086_00086Not AvailableNegative94275 - 9530338191.6
hypothetical proteinHMPREF2086_00087Not AvailableNegative95300 - 9610329344.0

Displaying genes 81 – 90 of 1992 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.