Helicobacter macacae MIT 99-5501

microaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter macacae MIT 99-5501 is a microaerophilic bacterium, meaning it requires reduced levels of oxygen for growth, which is characteristic of many members of the Helicobacter genus. This bacterium has been identified with a single replicon, indicating a straightforward genomic structure that may facilitate its adaptability and replication under specific environmental conditions. The strain is cataloged under the accession AZJI00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications in microbiological studies. The microaerophilic nature of H. macacae suggests that it may inhabit environments where oxygen levels are lower than atmospheric levels, possibly within the gastrointestinal tracts of certain host organisms. The ecological significance of Helicobacter macacae may lie in its interactions within the microbiome of primates, particularly in its potential roles in digestion or pathogen resistance. Understanding the characteristics of this bacterium can provide insights into the broader ecological dynamics of Helicobacter species and their adaptations to specific niches.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter macacae
StrainMIT 99-5501

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter macacae MIT 99-5501
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter macacae MIT 99-5501 addTE-supercont1.4.C12, whole

Gene Summary

Adenine Count

702297 bp

Thymine Count

698835 bp

Guanine Count

480726 bp

Cytosine Count

476899 bp

Genome Length

2358757 bp

Protein-coding Genes

1946 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF2086_01960Not AvailablePositive2320323 - 232088320457.5
phospho-n-acetylmuramoyl-pentapeptide- transferaseHMPREF2086_01961Not AvailablePositive2321123 - 232218739545.7
hypothetical proteinHMPREF2086_01962Not AvailablePositive2322187 - 232383961673.2
valine-trna ligaseHMPREF2086_01963Not AvailablePositive2323853 - 2326741108882.0
hypothetical proteinHMPREF2086_01964Not AvailableNegative2327098 - 232901770593.1
imidazole glycerol phosphate synthase, glutamine amidotransferase subunitHMPREF2086_01965Not AvailableNegative2329142 - 232983125263.3
isoleucine-trna ligaseHMPREF2086_01966Not AvailableNegative2329893 - 2332712106660.0
hydrogenase expression/formation protein hypdHMPREF2086_01967Not AvailableNegative2332931 - 233413343587.1
hypothetical proteinHMPREF2086_01968Not AvailableNegative2334179 - 233476921677.4
hydrogenase assembly chaperone hypc/hupfHMPREF2086_01969Not AvailableNegative2334797 - 233507510267.1

Displaying genes 1961 – 1970 of 1992 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.