Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Thioclava
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Thioclava |
| Species | Thioclava pacifica |
| Strain | DSM 10166 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
668236 bp
Thymine Count
678230 bp
Guanine Count
1206956 bp
Cytosine Count
1174871 bp
Genome Length
3728293 bp
Protein-coding Genes
3552 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein b4 | TP2_16060 | Not Available | Positive | 918721 - 921105 | 87034.4 |
| hypothetical protein | TP2_16065 | Not Available | Positive | 921102 - 921317 | 7281.82 |
| lytic transglycosylase | TP2_16070 | Not Available | Positive | 921322 - 922488 | 41457.2 |
| conjugal transfer protein traf | TP2_16075 | Not Available | Positive | 922485 - 923282 | 28352.7 |
| virb8 type iv secretion protein | TP2_16080 | Not Available | Positive | 923297 - 923944 | 23840.4 |
| conjugal transfer protein trbg | TP2_16085 | Not Available | Positive | 924049 - 924642 | 21911.7 |
| conjugal transfer protein | TP2_16090 | Not Available | Positive | 924639 - 925964 | 46372.7 |
| type ii secretion system protein e | TP2_16095 | Not Available | Positive | 925966 - 927000 | 37344.8 |
| hypothetical protein | TP2_16100 | Not Available | Positive | 927040 - 927435 | 14835.3 |
| trbl/virb6 plasmid conjugal transfer protein | TP2_16105 | Not Available | Positive | 927435 - 928460 | 35304.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
