Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Thioclava
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Thioclava |
| Species | Thioclava pacifica |
| Strain | DSM 10166 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
668236 bp
Thymine Count
678230 bp
Guanine Count
1206956 bp
Cytosine Count
1174871 bp
Genome Length
3728293 bp
Protein-coding Genes
3552 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TP2_00260 | Not Available | Positive | 54723 - 55562 | 29844.4 |
| hydrogenase nickel incorporation protein hypa | TP2_00265 | Not Available | Positive | 55555 - 55896 | 12368.0 |
| hypothetical protein | TP2_00270 | Not Available | Positive | 55929 - 56825 | 31835.7 |
| chemotaxis protein chey | TP2_00275 | Not Available | Positive | 56822 - 58297 | 53907.8 |
| hydrogenase assembly protein hupf | TP2_00280 | Not Available | Positive | 58297 - 58587 | 9951.89 |
| hydrogenase formation protein hypd | TP2_00285 | Not Available | Positive | 58593 - 59735 | 41363.8 |
| hydrogenase assembly protein hupf | TP2_00290 | Not Available | Positive | 59799 - 60818 | 34636.1 |
| hypothetical protein | TP2_00295 | Not Available | Negative | 60824 - 60994 | 5930.79 |
| uroporphyrinogen decarboxylase | TP2_00300 | Not Available | Negative | 61121 - 62152 | 37253.6 |
| hypothetical protein | TP2_00305 | Not Available | Positive | 62249 - 63202 | 34450.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
