Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Thioclava
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Thioclava |
| Species | Thioclava pacifica |
| Strain | DSM 10166 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
668236 bp
Thymine Count
678230 bp
Guanine Count
1206956 bp
Cytosine Count
1174871 bp
Genome Length
3728293 bp
Protein-coding Genes
3552 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter | TP2_11345 | Not Available | Positive | 2924497 - 2925579 | 37013.3 |
| hypothetical protein | TP2_11350 | Not Available | Positive | 2926311 - 2926805 | 18233.6 |
| hypothetical protein | TP2_11355 | Not Available | Positive | 2926809 - 2927816 | 36424.2 |
| hypothetical protein | TP2_11360 | Not Available | Positive | 2927813 - 2928175 | 13454.9 |
| hypothetical protein | TP2_11365 | Not Available | Positive | 2928175 - 2929989 | 65445.0 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | TP2_11370 | Not Available | Positive | 2930109 - 2931590 | 51801.7 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | TP2_11375 | Not Available | Positive | 2931590 - 2933038 | 50268.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | TP2_11380 | Not Available | Positive | 2933038 - 2934120 | 38593.1 |
| xanthine permease | TP2_11385 | Not Available | Positive | 2934310 - 2935680 | 47105.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetase | TP2_11390 | Not Available | Positive | 2935841 - 2937241 | 49842.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
