Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Thioclava
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Thioclava |
| Species | Thioclava pacifica |
| Strain | DSM 10166 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
668236 bp
Thymine Count
678230 bp
Guanine Count
1206956 bp
Cytosine Count
1174871 bp
Genome Length
3728293 bp
Protein-coding Genes
3552 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucoside abc transporter permease | TP2_09805 | Not Available | Positive | 2606278 - 2607255 | 36301.4 |
| hypothetical protein | TP2_09810 | Not Available | Positive | 2607255 - 2608409 | 41025.3 |
| hypothetical protein | TP2_09815 | Not Available | Positive | 2608409 - 2610049 | 62711.6 |
| sugar abc transporter atp-binding protein | TP2_09820 | Not Available | Positive | 2610059 - 2611144 | 39150.8 |
| trimethylamine methyltransferase | TP2_09825 | Not Available | Positive | 2611306 - 2612772 | 52987.2 |
| 3-dehydroquinate dehydratase | TP2_09830 | Not Available | Positive | 2612869 - 2613306 | 15983.0 |
| hypothetical protein | TP2_09835 | Not Available | Negative | 2613307 - 2613582 | 10454.2 |
| hypothetical protein | TP2_09840 | Not Available | Negative | 2613691 - 2614125 | 14425.0 |
| alpha-glucosidase | TP2_09845 | Not Available | Negative | 2614452 - 2616038 | 59675.9 |
| glycogen phosphorylase | TP2_09850 | Not Available | Positive | 2616219 - 2618606 | 90441.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
