Shewanella decolorationis S12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella decolorationis S12 is a notable bacterium characterized by the presence of flagella, which facilitates its motility in various environments. This organism possesses a single replicon, indicating a streamlined genetic structure that can contribute to its adaptability and efficiency in metabolic processes. The genomic data for Shewanella decolorationis S12 is cataloged under the accession AXZL00000000.1, providing a reference for further studies and analyses. Shewanella species, including S12, are often recognized for their unique metabolic capabilities, particularly in the reduction of metal ions and organic compounds. This trait allows them to thrive in diverse ecological niches, particularly in sedimentary environments and areas impacted by pollution. The ability to move via flagella may enhance its capacity to locate and utilize various substrates, further supporting its role in bioremediation. From a biological and ecological perspective, the traits of Shewanella decolorationis S12 suggest its potential importance in environmental processes. Its motility and metabolic versatility may facilitate nutrient cycling and the degradation of contaminants, making it a valuable organism in efforts to address ecological challenges related to pollution and ecosystem health. The study of this bacterium could provide insights into microbial processes that contribute to the resilience and recovery of affected environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella decolorationis
StrainS12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella decolorationis S12 Contig77, whole genome shotgun

Gene Summary

Adenine Count

1294093 bp

Thymine Count

1268765 bp

Guanine Count

1126214 bp

Cytosine Count

1154377 bp

Genome Length

4843966 bp

Protein-coding Genes

4219 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fumarate nitrate reduction transcriptional regulatorSHD_0035Not AvailableNegative34545 - 3522525275.7
cbb3-type cytochrome oxidase assembly protein disulfide bond oxidoreductase familySHD_0036Not AvailableNegative35353 - 3604524458.7
cytochrome oxidase maturation cbb3-typeSHD_0037Not AvailableNegative36042 - 362547860.5
heavy metal translocating p-type atpaseSHD_0038Not AvailableNegative36275 - 3868686735.0
hypothetical proteinSHD_0039Not AvailableNegative38697 - 3917618535.2
cytochrome c cbb3-type subunit iiiSHD_0040Not AvailableNegative39287 - 4025535150.2
cbb3-type cytochrome oxidase componentSHD_0041Not AvailableNegative40255 - 404316565.73
cbb3-type cytochrome c oxidase subunit iiSHD_0042Not AvailableNegative40443 - 4106923428.1
cbb3-type cytochrome c oxidase subunit iSHD_0043Not AvailableNegative41082 - 4251853568.9
hypothetical proteinSHD_0044Not AvailablePositive42817 - 4322715200.3

Displaying genes 41 – 50 of 4316 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.