Shewanella decolorationis S12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella decolorationis S12 is a notable bacterium characterized by the presence of flagella, which facilitates its motility in various environments. This organism possesses a single replicon, indicating a streamlined genetic structure that can contribute to its adaptability and efficiency in metabolic processes. The genomic data for Shewanella decolorationis S12 is cataloged under the accession AXZL00000000.1, providing a reference for further studies and analyses. Shewanella species, including S12, are often recognized for their unique metabolic capabilities, particularly in the reduction of metal ions and organic compounds. This trait allows them to thrive in diverse ecological niches, particularly in sedimentary environments and areas impacted by pollution. The ability to move via flagella may enhance its capacity to locate and utilize various substrates, further supporting its role in bioremediation. From a biological and ecological perspective, the traits of Shewanella decolorationis S12 suggest its potential importance in environmental processes. Its motility and metabolic versatility may facilitate nutrient cycling and the degradation of contaminants, making it a valuable organism in efforts to address ecological challenges related to pollution and ecosystem health. The study of this bacterium could provide insights into microbial processes that contribute to the resilience and recovery of affected environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella decolorationis
StrainS12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella decolorationis S12 Contig77, whole genome shotgun

Gene Summary

Adenine Count

1294093 bp

Thymine Count

1268765 bp

Guanine Count

1126214 bp

Cytosine Count

1154377 bp

Genome Length

4843966 bp

Protein-coding Genes

4219 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
esteraseSHD_0331Not AvailablePositive363536 - 36459139899.8
tryptophan synthase subunit alphaSHD_0332Not AvailableNegative364688 - 36552428822.4
tryptophan synthase subunit betaSHD_0333Not AvailableNegative365530 - 36672042808.6
bifunctional indole-3-glycerol phosphate synthase phosphoribosylanthranilate isomeraseSHD_0334Not AvailableNegative366829 - 36831653631.9
anthranilate phosphoribosyltransferaseSHD_0335Not AvailableNegative368316 - 36935936279.7
anthranilate synthase component iiSHD_0336Not AvailableNegative369359 - 36996721881.4
anthranilate synthase component iSHD_0337Not AvailableNegative369978 - 37166962107.5
phosphotransferase domain-containing proteinSHD_0338Not AvailablePositive372039 - 37289931321.0
sua6 family translation factorSHD_0339Not AvailablePositive372896 - 37351622966.6
chromosome segregation and condensation proteinSHD_0340Not AvailablePositive373706 - 37449429838.4

Displaying genes 351 – 360 of 4316 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.