Clostridium ragsdalei P11

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium ragsdalei P11 is a notable bacterium characterized by its single replicon structure, indicating a streamlined genetic organization. This species is classified within the Clostridia class, which encompasses various anaerobic, spore-forming bacteria. The accession number for Clostridium ragsdalei P11 is LROS00000000.1, signifying its inclusion in genomic databases that facilitate further research and exploration of its characteristics. The single replicon trait suggests a potential for efficient replication and genomic stability, which may contribute to the organism's adaptability in various environments. While specific ecological roles or metabolic pathways have not been detailed, members of the Clostridium genus are often associated with anaerobic environments, such as soil, sediments, and the gastrointestinal tracts of animals. Understanding the genetic framework of Clostridium ragsdalei P11 could provide insights into its ecological interactions and potential applications in biotechnology or medicine. The organism's unique genetic structure may also inform studies on microbial diversity and the evolutionary adaptations of anaerobic bacteria. As research progresses, Clostridium ragsdalei P11 may reveal further biological significance, particularly in its interactions within microbial communities or its potential roles in biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium ragsdalei
StrainP11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium ragsdalei P11 CLRAG_contig000079, whole genome shotgun

Gene Summary

Adenine Count

1493359 bp

Thymine Count

1558228 bp

Guanine Count

646044 bp

Cytosine Count

727361 bp

Genome Length

4424992 bp

Protein-coding Genes

3946 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytidine deaminaseCLRAG_00540Not AvailableNegative56495 - 5689314273.9
5s ribosomal rnaNot AvailableNot AvailablePositive57223 - 57338Not Available
macrolide export atp-binding/permease protein macbCLRAG_00550Not AvailableNegative57011 - 5822243619.4
macrolide export atp-binding/permease protein macbCLRAG_00560Not AvailableNegative58224 - 5893125993.8
multidrug resistance protein mdta precursorCLRAG_00570Not AvailableNegative58928 - 6000739271.0
yip1 domain proteinCLRAG_00580Not AvailableNegative60155 - 6082324325.0
mannosyl-d-glycerate transport/metabolism system repressor mngrCLRAG_00590Not AvailableNegative61238 - 6187023894.9
4-hydroxy-tetrahydrodipicolinate reductaseCLRAG_00600Not AvailablePositive62290 - 6317132294.6
n-acetylmuramoyl-l-alanine amidase lytc precursorCLRAG_00610Not AvailableNegative63251 - 6549483068.0
bacterial sh3 domain proteinCLRAG_00620Not AvailablePositive65742 - 6689041782.1

Displaying genes 61 – 70 of 4025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.