Clostridium ragsdalei P11

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium ragsdalei P11 is a notable bacterium characterized by its single replicon structure, indicating a streamlined genetic organization. This species is classified within the Clostridia class, which encompasses various anaerobic, spore-forming bacteria. The accession number for Clostridium ragsdalei P11 is LROS00000000.1, signifying its inclusion in genomic databases that facilitate further research and exploration of its characteristics. The single replicon trait suggests a potential for efficient replication and genomic stability, which may contribute to the organism's adaptability in various environments. While specific ecological roles or metabolic pathways have not been detailed, members of the Clostridium genus are often associated with anaerobic environments, such as soil, sediments, and the gastrointestinal tracts of animals. Understanding the genetic framework of Clostridium ragsdalei P11 could provide insights into its ecological interactions and potential applications in biotechnology or medicine. The organism's unique genetic structure may also inform studies on microbial diversity and the evolutionary adaptations of anaerobic bacteria. As research progresses, Clostridium ragsdalei P11 may reveal further biological significance, particularly in its interactions within microbial communities or its potential roles in biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium ragsdalei
StrainP11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium ragsdalei P11 CLRAG_contig000079, whole genome shotgun

Gene Summary

Adenine Count

1493359 bp

Thymine Count

1558228 bp

Guanine Count

646044 bp

Cytosine Count

727361 bp

Genome Length

4424992 bp

Protein-coding Genes

3946 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inner membrane symporter yicjCLRAG_30170Not AvailableNegative3297639 - 329901250663.4
intracellular exo-alpha-(1->5)-l-arabinofuranosidaseCLRAG_30180Not AvailableNegative3299052 - 330058457903.2
arabinose metabolism transcriptional repressorCLRAG_30190Not AvailableNegative3300801 - 330188641163.8
ribulokinaseCLRAG_30200Not AvailablePositive3302263 - 330386758749.9
l-ribulose-5-phosphate 4-epimeraseCLRAG_30210Not AvailablePositive3303992 - 330469325970.1
l-arabinose isomeraseCLRAG_30220Not AvailablePositive3304714 - 330618055333.4
maltose epimeraseCLRAG_30230Not AvailablePositive3306288 - 330732238558.6
putative peptidyl-prolyl cis-trans isomerase cbf2 precursorCLRAG_30240Not AvailableNegative3307432 - 330817528476.9
Trna-pheNot AvailableNot AvailablePositive3308281 - 3308356Not Available
serine-pyruvate aminotransferaseCLRAG_30270Not AvailableNegative3309819 - 331096443074.6

Displaying genes 3021 – 3030 of 4025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.