Clostridium ragsdalei P11

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium ragsdalei P11 is a notable bacterium characterized by its single replicon structure, indicating a streamlined genetic organization. This species is classified within the Clostridia class, which encompasses various anaerobic, spore-forming bacteria. The accession number for Clostridium ragsdalei P11 is LROS00000000.1, signifying its inclusion in genomic databases that facilitate further research and exploration of its characteristics. The single replicon trait suggests a potential for efficient replication and genomic stability, which may contribute to the organism's adaptability in various environments. While specific ecological roles or metabolic pathways have not been detailed, members of the Clostridium genus are often associated with anaerobic environments, such as soil, sediments, and the gastrointestinal tracts of animals. Understanding the genetic framework of Clostridium ragsdalei P11 could provide insights into its ecological interactions and potential applications in biotechnology or medicine. The organism's unique genetic structure may also inform studies on microbial diversity and the evolutionary adaptations of anaerobic bacteria. As research progresses, Clostridium ragsdalei P11 may reveal further biological significance, particularly in its interactions within microbial communities or its potential roles in biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium ragsdalei
StrainP11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium ragsdalei P11 CLRAG_contig000079, whole genome shotgun

Gene Summary

Adenine Count

1493359 bp

Thymine Count

1558228 bp

Guanine Count

646044 bp

Cytosine Count

727361 bp

Genome Length

4424992 bp

Protein-coding Genes

3946 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l20CLRAG_14520Not AvailableNegative1567859 - 156821813725.1
50s ribosomal protein l35CLRAG_14530Not AvailableNegative1568247 - 15684447492.67
translation initiation factor if-3CLRAG_14540Not AvailableNegative1568464 - 156898519957.8
threonine--trna ligase 2CLRAG_14550Not AvailableNegative1569185 - 157109873537.5
ytxc-like family proteinCLRAG_14560Not AvailableNegative1571992 - 157289135115.5
Trna-valNot AvailableNot AvailablePositive1573136 - 1573211Not Available
Trna-pheNot AvailableNot AvailablePositive1573275 - 1573350Not Available
Trna-glyNot AvailableNot AvailablePositive1573363 - 1573437Not Available
Trna-cysNot AvailableNot AvailablePositive1573443 - 1573516Not Available
putative l,d-transpeptidase ykudCLRAG_14610Not AvailableNegative1573656 - 157431824856.5

Displaying genes 1461 – 1470 of 4025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.