Clostridium ragsdalei P11

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium ragsdalei P11 is a notable bacterium characterized by its single replicon structure, indicating a streamlined genetic organization. This species is classified within the Clostridia class, which encompasses various anaerobic, spore-forming bacteria. The accession number for Clostridium ragsdalei P11 is LROS00000000.1, signifying its inclusion in genomic databases that facilitate further research and exploration of its characteristics. The single replicon trait suggests a potential for efficient replication and genomic stability, which may contribute to the organism's adaptability in various environments. While specific ecological roles or metabolic pathways have not been detailed, members of the Clostridium genus are often associated with anaerobic environments, such as soil, sediments, and the gastrointestinal tracts of animals. Understanding the genetic framework of Clostridium ragsdalei P11 could provide insights into its ecological interactions and potential applications in biotechnology or medicine. The organism's unique genetic structure may also inform studies on microbial diversity and the evolutionary adaptations of anaerobic bacteria. As research progresses, Clostridium ragsdalei P11 may reveal further biological significance, particularly in its interactions within microbial communities or its potential roles in biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium ragsdalei
StrainP11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium ragsdalei P11 CLRAG_contig000079, whole genome shotgun

Gene Summary

Adenine Count

1493359 bp

Thymine Count

1558228 bp

Guanine Count

646044 bp

Cytosine Count

727361 bp

Genome Length

4424992 bp

Protein-coding Genes

3946 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron-sulfur proteinCLRAG_13920Not AvailablePositive1488037 - 148849216957.4
nadh-dependent phenylglyoxylate dehydrogenase subunit epsilonCLRAG_13930Not AvailablePositive1488489 - 148975146330.2
n-acetylmuramoyl-l-alanine amidase lytc precursorCLRAG_13940Not AvailableNegative1490435 - 1495615187406.0
3-isopropylmalate dehydrogenaseCLRAG_13950Not AvailableNegative1495894 - 149695838607.0
2,3-dimethylmalate dehydratase small subunitCLRAG_13960Not AvailableNegative1496955 - 149744918235.0
2,3-dimethylmalate dehydratase large subunitCLRAG_13970Not AvailableNegative1497449 - 149871445450.2
2-isopropylmalate synthaseCLRAG_13980Not AvailableNegative1498743 - 150027555753.7
methyl-accepting chemotaxis protein 4CLRAG_13990Not AvailablePositive1501086 - 150320077125.2
putative gtp cyclohydrolase 1 type 2CLRAG_14000Not AvailableNegative1503242 - 150357712739.2
hypothetical proteinCLRAG_14010Not AvailableNegative1503667 - 150453630895.0

Displaying genes 1401 – 1410 of 4025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.