Helicobacter pylori UM085

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori UM085 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and presence of flagella. This species typically exists as single cells and is classified as host-associated, indicating its relationship with specific hosts. H. pylori UM085 thrives optimally at 37°C, falling within the mesophilic temperature range. The bacterium has a unique cellular structure, featuring two membranes and a single replicon, which is indicative of its genetic organization. The presence of flagella contributes to its motility; however, H. pylori UM085 is noted for its lack of mobility in certain contexts. H. pylori UM085 is categorized as free-living, suggesting it can survive outside a host environment, although its primary habitat is associated with hosts. This ecological flexibility may allow it to adapt to various environments, potentially influencing its transmission and pathogenicity. In summary, H. pylori UM085's specific traits, such as its microaerophilic nature and mesophilic growth conditions, highlight its adaptation to a host-associated lifestyle while retaining the ability to exist in free-living states. This duality may play a significant role in its ecological interactions and the dynamics of its spread within and between host populations. The accession number for further reference is AUSP00000000.1.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainUM085

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori UM085
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori UM085 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

507348 bp

Thymine Count

500499 bp

Guanine Count

319476 bp

Cytosine Count

317738 bp

Genome Length

1645062 bp

Protein-coding Genes

1604 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4'-phosphopantetheinyl transferaseN204_05080Not AvailablePositive657875 - 65823112895.9
ligand-gated channelN204_05090Not AvailablePositive658421 - 66079389128.6
metalloproteaseN204_05095Not AvailableNegative660804 - 66142123999.5
lipooligosaccharide 5g8 epitope biosynthesis-associated protein (lex2b)N204_05100Not AvailablePositive661500 - 66234232473.9
type 11 methyltransferaseN204_05105Not AvailableNegative662418 - 66323631886.6
hypothetical proteinN204_05110Not AvailablePositive663202 - 6633124172.04
hypothetical proteinN204_05115Not AvailableNegative663320 - 6634575007.13
3,4-dihydroxy-2-butanone 4-phosphate synthaseN204_05120Not AvailablePositive663612 - 66464638822.0
ubiquitin-protein ligaseN204_05125Not AvailablePositive664827 - 66557328406.7
gtp cyclohydrolaseN204_05130Not AvailablePositive665691 - 66626921583.1

Displaying genes 691 – 700 of 1651 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.