Helicobacter pylori UM085

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori UM085 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and presence of flagella. This species typically exists as single cells and is classified as host-associated, indicating its relationship with specific hosts. H. pylori UM085 thrives optimally at 37°C, falling within the mesophilic temperature range. The bacterium has a unique cellular structure, featuring two membranes and a single replicon, which is indicative of its genetic organization. The presence of flagella contributes to its motility; however, H. pylori UM085 is noted for its lack of mobility in certain contexts. H. pylori UM085 is categorized as free-living, suggesting it can survive outside a host environment, although its primary habitat is associated with hosts. This ecological flexibility may allow it to adapt to various environments, potentially influencing its transmission and pathogenicity. In summary, H. pylori UM085's specific traits, such as its microaerophilic nature and mesophilic growth conditions, highlight its adaptation to a host-associated lifestyle while retaining the ability to exist in free-living states. This duality may play a significant role in its ecological interactions and the dynamics of its spread within and between host populations. The accession number for further reference is AUSP00000000.1.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainUM085

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori UM085
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori UM085 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

507348 bp

Thymine Count

500499 bp

Guanine Count

319476 bp

Cytosine Count

317738 bp

Genome Length

1645062 bp

Protein-coding Genes

1604 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine desulfaraseN204_01240Not AvailableNegative1046085 - 104724842463.0
dna-binding proteinN204_01245Not AvailableNegative1047421 - 104788217868.9
phospholipid-binding proteinN204_01250Not AvailablePositive1047948 - 104857723775.8
beta-1,4-n-acetylgalactosamyltransferaseN204_01255Not AvailableNegative1048593 - 104973545063.0
1-deoxy-d-xylulose 5-phosphate reductoisomeraseN204_01260Not AvailableNegative1049786 - 105089240152.3
phosphatidate cytidylyltransferaseN204_01265Not AvailableNegative1050893 - 105169328866.1
carboxylate transporterN204_01270Not AvailableNegative1051706 - 105336459977.3
trna uridine 5-carboxymethylaminomethyl modification proteinN204_01275Not AvailablePositive1053460 - 105532569739.1
succinyl-diaminopimelate desuccinylaseN204_01280Not AvailablePositive1055336 - 105648742383.4
hypothetical proteinN204_01285Not AvailablePositive1056621 - 10567404703.05

Displaying genes 1091 – 1100 of 1651 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.