Croceicoccus naphthovorans str. PQ-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Croceicoccus

Description

Croceicoccus naphthovorans str. PQ-2 is characterized by a single replicon, which indicates a streamlined genomic structure. This organism is notable for its ability to degrade naphthalene, a polycyclic aromatic hydrocarbon (PAH), which suggests a potential role in bioremediation processes. The accession number for this strain is NZ_CP011770.1, which provides a reference for genomic information and further studies. The ability to utilize naphthalene as a carbon source is significant in ecological contexts, especially in environments contaminated with PAHs. Microorganisms like Croceicoccus naphthovorans str. PQ-2 contribute to the natural attenuation of such pollutants, playing a crucial role in maintaining ecosystem health. Their metabolic capabilities can be harnessed in biotechnological applications aimed at environmental cleanup. In summary, Croceicoccus naphthovorans str. PQ-2 is a single-replicon bacterium with specialized functions in degrading naphthalene, highlighting its potential utility in bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusCroceicoccus
SpeciesCroceicoccus naphthovorans
StrainPQ-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Croceicoccus naphthovorans strain PQ-2 chromosome, complete

Gene Summary

Adenine Count

659323 bp

Thymine Count

665974 bp

Guanine Count

1112246 bp

Cytosine Count

1106263 bp

Genome Length

3543806 bp

Protein-coding Genes

3447 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
autotransporter-associated beta strand repeat-containing proteinAB433_RS15035Not AvailablePositive3026421 - 302808555633.2
Serine proteaseAB433_RS15040Not AvailablePositive3028133 - 302994161709.9
Isrso12-transposase orfb proteinAB433_RS21350Not AvailableNegative3030016 - 30301475412.4
Isbmu23 transposaseAB433_RS15045Not AvailableNegative3030311 - 303122532929.5
Is1595 transposaseAB433_RS20130Not AvailablePositive3032066 - 303297134854.9
hypothetical proteinAB433_RS21075Not AvailablePositive3033303 - 303359610837.8
hypothetical proteinAB433_RS15055Not AvailablePositive3033584 - 303423424488.1
Is1595 transposaseAB433_RS15060Not AvailableNegative3034306 - 303521734443.8
Gdp-l-fucose synthaseAB433_RS15065Not AvailableNegative3036073 - 303702935190.3
Gdp-d-mannose 4,6-dehydrataseAB433_RS15070Not AvailableNegative3037039 - 303816041930.6

Displaying genes 81 – 90 of 3574 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.