Croceicoccus naphthovorans str. PQ-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Croceicoccus

Description

Croceicoccus naphthovorans str. PQ-2 is characterized by a single replicon, which indicates a streamlined genomic structure. This organism is notable for its ability to degrade naphthalene, a polycyclic aromatic hydrocarbon (PAH), which suggests a potential role in bioremediation processes. The accession number for this strain is NZ_CP011770.1, which provides a reference for genomic information and further studies. The ability to utilize naphthalene as a carbon source is significant in ecological contexts, especially in environments contaminated with PAHs. Microorganisms like Croceicoccus naphthovorans str. PQ-2 contribute to the natural attenuation of such pollutants, playing a crucial role in maintaining ecosystem health. Their metabolic capabilities can be harnessed in biotechnological applications aimed at environmental cleanup. In summary, Croceicoccus naphthovorans str. PQ-2 is a single-replicon bacterium with specialized functions in degrading naphthalene, highlighting its potential utility in bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusCroceicoccus
SpeciesCroceicoccus naphthovorans
StrainPQ-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Croceicoccus naphthovorans strain PQ-2 chromosome, complete

Gene Summary

Adenine Count

659323 bp

Thymine Count

665974 bp

Guanine Count

1112246 bp

Cytosine Count

1106263 bp

Genome Length

3543806 bp

Protein-coding Genes

3447 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-leuNot AvailableNot AvailablePositive319355 - 319439Not Available
integration host factor subunit betaAB433_RS01600Not AvailableNegative319523 - 31980410399.3
gntr family transcriptional regulatorAB433_RS01605Not AvailableNegative320001 - 32036013234.9
peptide mfs transporterAB433_RS01610Not AvailablePositive320510 - 32215059039.0
hypothetical proteinAB433_RS01615Not AvailableNegative322165 - 32257215700.5
1-deoxy-d-xylulose-5-phosphate synthaseAB433_RS01620Not AvailableNegative322572 - 32450968602.7
peptide-methionine (r)-s-oxide reductase msrbAB433_RS01625Not AvailableNegative324565 - 32505317723.0
abc transporter permeaseAB433_RS01630Not AvailableNegative325114 - 32635244172.4
abc transporter atp-binding proteinAB433_RS01635Not AvailableNegative326349 - 32736235880.2
trna epoxyqueuosine(34) reductase quegAB433_RS01640Not AvailablePositive327425 - 32849838811.4

Displaying genes 451 – 460 of 3574 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.