Croceicoccus naphthovorans str. PQ-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Croceicoccus

Description

Croceicoccus naphthovorans str. PQ-2 is characterized by a single replicon, which indicates a streamlined genomic structure. This organism is notable for its ability to degrade naphthalene, a polycyclic aromatic hydrocarbon (PAH), which suggests a potential role in bioremediation processes. The accession number for this strain is NZ_CP011770.1, which provides a reference for genomic information and further studies. The ability to utilize naphthalene as a carbon source is significant in ecological contexts, especially in environments contaminated with PAHs. Microorganisms like Croceicoccus naphthovorans str. PQ-2 contribute to the natural attenuation of such pollutants, playing a crucial role in maintaining ecosystem health. Their metabolic capabilities can be harnessed in biotechnological applications aimed at environmental cleanup. In summary, Croceicoccus naphthovorans str. PQ-2 is a single-replicon bacterium with specialized functions in degrading naphthalene, highlighting its potential utility in bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusCroceicoccus
SpeciesCroceicoccus naphthovorans
StrainPQ-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Croceicoccus naphthovorans strain PQ-2 chromosome, complete

Gene Summary

Adenine Count

659323 bp

Thymine Count

665974 bp

Guanine Count

1112246 bp

Cytosine Count

1106263 bp

Genome Length

3543806 bp

Protein-coding Genes

3447 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad-dependent oxidoreductaseAB433_RS01265Not AvailablePositive249648 - 25124357994.2
hypothetical proteinAB433_RS01270Not AvailableNegative251245 - 25251346366.0
response regulator transcription factorAB433_RS01275Not AvailablePositive252655 - 25333224645.0
hamp domain-containing sensor histidine kinaseAB433_RS01280Not AvailablePositive253329 - 25469049624.0
Trna-thrNot AvailableNot AvailablePositive254701 - 254776Not Available
Trna-cysNot AvailableNot AvailablePositive254814 - 254887Not Available
ll-diaminopimelate aminotransferaseAB433_RS01295Not AvailableNegative254974 - 25616443926.7
pha/phb synthase family proteinAB433_RS01300Not AvailablePositive256365 - 25834172685.2
phasin family proteinAB433_RS01305Not AvailablePositive258542 - 25935427802.9
atp-dependent clp protease adapter clpsAB433_RS01310Not AvailablePositive259655 - 26000513133.8

Displaying genes 381 – 390 of 3574 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.