Croceicoccus naphthovorans str. PQ-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Croceicoccus

Description

Croceicoccus naphthovorans str. PQ-2 is characterized by a single replicon, which indicates a streamlined genomic structure. This organism is notable for its ability to degrade naphthalene, a polycyclic aromatic hydrocarbon (PAH), which suggests a potential role in bioremediation processes. The accession number for this strain is NZ_CP011770.1, which provides a reference for genomic information and further studies. The ability to utilize naphthalene as a carbon source is significant in ecological contexts, especially in environments contaminated with PAHs. Microorganisms like Croceicoccus naphthovorans str. PQ-2 contribute to the natural attenuation of such pollutants, playing a crucial role in maintaining ecosystem health. Their metabolic capabilities can be harnessed in biotechnological applications aimed at environmental cleanup. In summary, Croceicoccus naphthovorans str. PQ-2 is a single-replicon bacterium with specialized functions in degrading naphthalene, highlighting its potential utility in bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusCroceicoccus
SpeciesCroceicoccus naphthovorans
StrainPQ-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Croceicoccus naphthovorans strain PQ-2 chromosome, complete

Gene Summary

Adenine Count

659323 bp

Thymine Count

665974 bp

Guanine Count

1112246 bp

Cytosine Count

1106263 bp

Genome Length

3543806 bp

Protein-coding Genes

3447 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinAB433_RS01215Not AvailableNegative237385 - 23842237376.1
carbohydrate abc transporter permeaseAB433_RS01220Not AvailableNegative238426 - 23925930400.1
carbohydrate abc transporter permeaseAB433_RS01225Not AvailableNegative239256 - 24017933725.1
abc transporter substrate-binding proteinAB433_RS01230Not AvailableNegative240176 - 24148647386.9
glucosylglycerol-phosphate synthaseAB433_RS01235Not AvailableNegative241486 - 24300657324.3
had-iib family hydrolaseAB433_RS01240Not AvailableNegative243028 - 24380128329.8
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseAB433_RS01245Not AvailableNegative243801 - 24484735982.5
alpha-amylase family glycosyl hydrolaseAB433_RS01250Not AvailablePositive245260 - 24689160967.7
voc family proteinAB433_RS01255Not AvailableNegative246894 - 24811744100.2
lipopolysaccharide biosynthesis proteinAB433_RS01260Not AvailableNegative248180 - 24951746792.7

Displaying genes 371 – 380 of 3574 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.