Croceicoccus naphthovorans str. PQ-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Croceicoccus

Description

Croceicoccus naphthovorans str. PQ-2 is characterized by a single replicon, which indicates a streamlined genomic structure. This organism is notable for its ability to degrade naphthalene, a polycyclic aromatic hydrocarbon (PAH), which suggests a potential role in bioremediation processes. The accession number for this strain is NZ_CP011770.1, which provides a reference for genomic information and further studies. The ability to utilize naphthalene as a carbon source is significant in ecological contexts, especially in environments contaminated with PAHs. Microorganisms like Croceicoccus naphthovorans str. PQ-2 contribute to the natural attenuation of such pollutants, playing a crucial role in maintaining ecosystem health. Their metabolic capabilities can be harnessed in biotechnological applications aimed at environmental cleanup. In summary, Croceicoccus naphthovorans str. PQ-2 is a single-replicon bacterium with specialized functions in degrading naphthalene, highlighting its potential utility in bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusCroceicoccus
SpeciesCroceicoccus naphthovorans
StrainPQ-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Croceicoccus naphthovorans strain PQ-2 chromosome, complete

Gene Summary

Adenine Count

659323 bp

Thymine Count

665974 bp

Guanine Count

1112246 bp

Cytosine Count

1106263 bp

Genome Length

3543806 bp

Protein-coding Genes

3447 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf389 domain-containing proteinAB433_RS05435Not AvailablePositive1080180 - 108174555357.6
mapeg family proteinAB433_RS05440Not AvailablePositive1081745 - 108214314458.4
fatty acyl-amp ligaseAB433_RS05445Not AvailableNegative1082313 - 108406463955.1
regulatory protein recxAB433_RS05450Not AvailablePositive1084334 - 108485819145.3
duf192 domain-containing proteinAB433_RS05455Not AvailablePositive1084855 - 108539419135.0
nadh:ubiquinone oxidoreductase subunit ndufa12AB433_RS05460Not AvailablePositive1085458 - 108585614553.8
duf2155 domain-containing proteinAB433_RS05465Not AvailablePositive1085853 - 108641620049.3
leucyl/phenylalanyl-trna--protein transferaseAB433_RS05470Not AvailableNegative1086326 - 108706326874.4
Trna-trpNot AvailableNot AvailablePositive1087147 - 1087222Not Available
stealth cr1 domain-containing proteinAB433_RS05480Not AvailablePositive1087330 - 108826534998.6

Displaying genes 1211 – 1220 of 3574 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.