Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium ummariense |
| Strain | RL-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
831480 bp
Thymine Count
831934 bp
Guanine Count
1547934 bp
Cytosine Count
1542693 bp
Genome Length
4754053 bp
Protein-coding Genes
4608 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M529_02170 | Not Available | Positive | 431093 - 431971 | 31231.7 |
| trna synthetase class ii | M529_02175 | Not Available | Negative | 431965 - 433095 | 40273.1 |
| 3-phosphoglycerate dehydrogenase | M529_02180 | Not Available | Negative | 433150 - 434733 | 55491.2 |
| phosphoserine aminotransferase | M529_02185 | Not Available | Negative | 434847 - 436010 | 41400.1 |
| extensin family protein | M529_02190 | Not Available | Positive | 436186 - 436875 | 23974.9 |
| lysine decarboxylase | M529_02195 | Not Available | Positive | 436917 - 437804 | 33386.9 |
| had family hydrolase | M529_02200 | Not Available | Positive | 437870 - 438541 | 24531.4 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | M529_02205 | Not Available | Positive | 438538 - 439377 | 29551.4 |
| metal abc transporter permease | M529_02210 | Not Available | Positive | 439437 - 441281 | 67753.1 |
| hypothetical protein | M529_02215 | Not Available | Positive | 441342 - 441719 | 13805.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

