Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium ummariense |
| Strain | RL-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
831480 bp
Thymine Count
831934 bp
Guanine Count
1547934 bp
Cytosine Count
1542693 bp
Genome Length
4754053 bp
Protein-coding Genes
4608 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoisovalerate dehydrogenase subunit beta | M529_00715 | Not Available | Negative | 126027 - 127073 | 38162.9 |
| 2-oxoisovalerate dehydrogenase subunit alpha | M529_00720 | Not Available | Negative | 127191 - 128486 | 47135.6 |
| thymidylate synthase | M529_00725 | Not Available | Negative | 128591 - 129520 | 35098.9 |
| Trna-pro | Not Available | Not Available | Positive | 129659 - 129735 | Not Available |
| arsr family transcriptional regulator | M529_00735 | Not Available | Positive | 129760 - 130251 | 17968.8 |
| hypothetical protein | M529_00740 | Not Available | Negative | 130267 - 131508 | 43848.5 |
| tonb-denpendent receptor | M529_00745 | Not Available | Negative | 131575 - 134502 | 104870.0 |
| dioxygenase | M529_00750 | Not Available | Negative | 134773 - 136245 | 52301.8 |
| glucuronate isomerase | M529_00755 | Not Available | Negative | 136242 - 137654 | 52977.9 |
| hexuranate mfs transporter | M529_00760 | Not Available | Negative | 137651 - 138928 | 46301.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

