Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium ummariense |
| Strain | RL-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
831480 bp
Thymine Count
831934 bp
Guanine Count
1547934 bp
Cytosine Count
1542693 bp
Genome Length
4754053 bp
Protein-coding Genes
4608 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M529_06925 | Not Available | Negative | 1347514 - 1347813 | 10154.7 |
| peptidoglycan-binding protein | M529_06930 | Not Available | Negative | 1347818 - 1349269 | 52036.9 |
| histone deacetylase | M529_06935 | Not Available | Positive | 1349315 - 1350265 | 33915.9 |
| hypothetical protein | M529_06940 | Not Available | Positive | 1350328 - 1353576 | 116753.0 |
| hypothetical protein | M529_06945 | Not Available | Negative | 1353580 - 1354146 | 19161.6 |
| phosphoribosyl-atp pyrophosphatase | M529_06950 | Not Available | Negative | 1354233 - 1354553 | 11516.8 |
| hypothetical protein | M529_06955 | Not Available | Negative | 1354595 - 1354846 | 8237.02 |
| imidazole glycerol phosphate synthase | M529_06960 | Not Available | Negative | 1355011 - 1355775 | 26339.4 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | M529_06965 | Not Available | Negative | 1355787 - 1356524 | 25501.5 |
| imidazole glycerol phosphate synthase | M529_06970 | Not Available | Negative | 1356556 - 1357170 | 21789.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

