Salinimicrobium sediminis

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Salinimicrobium

Description

Salinimicrobium sediminis is a microbial species characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in saline environments. The organism is cataloged under the accession number OCMF00000000.1, which serves as a reference for its genomic information. This species thrives in saline conditions, suggesting potential roles in biogeochemical cycles within such environments. The presence of a singular replicon may allow for efficient replication and regulation of essential genes, potentially enabling Salinimicrobium sediminis to withstand osmotic stress and utilize available resources effectively. The ecological significance of Salinimicrobium sediminis lies in its adaptation to extreme saline habitats, which may contribute to microbial diversity and functionality in such ecosystems. Understanding the genetic and physiological traits of Salinimicrobium sediminis can provide insights into microbial life in high-salinity environments, highlighting the importance of such organisms in maintaining ecological balance and nutrient cycling in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSalinimicrobium
SpeciesSalinimicrobium sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinimicrobium sediminis strain CGMCC 1.12641 genome assembly,

Gene Summary

Adenine Count

1015499 bp

Thymine Count

1014981 bp

Guanine Count

719992 bp

Cytosine Count

731817 bp

Genome Length

3482289 bp

Protein-coding Genes

3119 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeatSAMN06296241_0901Not AvailablePositive982674 - 98451268245.5
metal-dependent hydrolase, endonuclease/exonuclease/phosphatase familySAMN06296241_0902Not AvailablePositive984512 - 98531829873.8
beta-lactamase class aSAMN06296241_0903Not AvailableNegative985578 - 98648333014.8
sh3 domain-containing proteinSAMN06296241_0904Not AvailableNegative986577 - 98780945595.8
predicted oxidoreductaseSAMN06296241_0905Not AvailableNegative987863 - 98884336447.7
l-alanine-dl-glutamate epimeraseSAMN06296241_0906Not AvailableNegative988847 - 98987238347.1
n-terminal ig-like domain of cellulaseSAMN06296241_0907Not AvailableNegative989876 - 99168468602.1
transporter, sss familySAMN06296241_0908Not AvailableNegative991713 - 99315253540.3
uncharacterized lipoprotein yddw, upf0748 familySAMN06296241_0909Not AvailableNegative993170 - 99481962819.6
starch-binding associating with outer membraneSAMN06296241_0910Not AvailableNegative994932 - 99668065857.6

Displaying genes 931 – 940 of 3184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.