Salinimicrobium sediminis

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Salinimicrobium

Description

Salinimicrobium sediminis is a microbial species characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in saline environments. The organism is cataloged under the accession number OCMF00000000.1, which serves as a reference for its genomic information. This species thrives in saline conditions, suggesting potential roles in biogeochemical cycles within such environments. The presence of a singular replicon may allow for efficient replication and regulation of essential genes, potentially enabling Salinimicrobium sediminis to withstand osmotic stress and utilize available resources effectively. The ecological significance of Salinimicrobium sediminis lies in its adaptation to extreme saline habitats, which may contribute to microbial diversity and functionality in such ecosystems. Understanding the genetic and physiological traits of Salinimicrobium sediminis can provide insights into microbial life in high-salinity environments, highlighting the importance of such organisms in maintaining ecological balance and nutrient cycling in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSalinimicrobium
SpeciesSalinimicrobium sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinimicrobium sediminis strain CGMCC 1.12641 genome assembly,

Gene Summary

Adenine Count

1015499 bp

Thymine Count

1014981 bp

Guanine Count

719992 bp

Cytosine Count

731817 bp

Genome Length

3482289 bp

Protein-coding Genes

3119 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pp_00875SAMN06296241_0891Not AvailableNegative967204 - 968196Not Available
outer membrane receptor proteins, mostly fe transportSAMN06296241_0892Not AvailableNegative968719 - 97112491782.5
tigr00659 family proteinSAMN06296241_0893Not AvailableNegative971282 - 97197124261.9
holin-like proteinSAMN06296241_0894Not AvailableNegative971968 - 97234514501.6
beta-glucosidaseSAMN06296241_0895Not AvailableNegative972385 - 975321110041.0
predicted acyltransferaseSAMN06296241_0896Not AvailableNegative975364 - 97653644466.5
sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domainSAMN06296241_0897Not AvailablePositive976733 - 97798946126.1
glucosamine-6-phosphate deaminaseSAMN06296241_0898Not AvailablePositive978018 - 97993772940.3
n-acetylmuramoyl-l-alanine amidaseSAMN06296241_0899Not AvailablePositive979942 - 98086234682.9
uncharacterized conserved protein ybbc, duf1343 familySAMN06296241_0900Not AvailablePositive980866 - 98265367176.5

Displaying genes 921 – 930 of 3184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.