Salinimicrobium sediminis

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Salinimicrobium

Description

Salinimicrobium sediminis is a microbial species characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in saline environments. The organism is cataloged under the accession number OCMF00000000.1, which serves as a reference for its genomic information. This species thrives in saline conditions, suggesting potential roles in biogeochemical cycles within such environments. The presence of a singular replicon may allow for efficient replication and regulation of essential genes, potentially enabling Salinimicrobium sediminis to withstand osmotic stress and utilize available resources effectively. The ecological significance of Salinimicrobium sediminis lies in its adaptation to extreme saline habitats, which may contribute to microbial diversity and functionality in such ecosystems. Understanding the genetic and physiological traits of Salinimicrobium sediminis can provide insights into microbial life in high-salinity environments, highlighting the importance of such organisms in maintaining ecological balance and nutrient cycling in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSalinimicrobium
SpeciesSalinimicrobium sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinimicrobium sediminis strain CGMCC 1.12641 genome assembly,

Gene Summary

Adenine Count

1015499 bp

Thymine Count

1014981 bp

Guanine Count

719992 bp

Cytosine Count

731817 bp

Genome Length

3482289 bp

Protein-coding Genes

3119 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mannonate dehydrataseSAMN06296241_0830Not AvailableNegative887760 - 88895045154.0
polygalacturonaseSAMN06296241_0831Not AvailableNegative889053 - 89041750506.2
cupin domain proteinSAMN06296241_0832Not AvailableNegative890423 - 89078813321.1
pectate lyase, pela/pel-15e familySAMN06296241_0833Not AvailableNegative890758 - 89257269687.1
pectin methylesteraseSAMN06296241_0834Not AvailableNegative892626 - 89452170683.0
concanavalin a-like lectin/glucanases superfamily proteinSAMN06296241_0835Not AvailableNegative894561 - 89520524652.9
pectate lyase superfamily proteinSAMN06296241_0836Not AvailableNegative895226 - 89666853325.2
transcriptional regulator, laci familySAMN06296241_0837Not AvailablePositive896921 - 89796738919.9
altronate hydrolaseSAMN06296241_0838Not AvailableNegative897991 - 89960758217.5
tagaturonate reductaseSAMN06296241_0839Not AvailableNegative899613 - 90107055810.8

Displaying genes 861 – 870 of 3184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.