Salinimicrobium sediminis

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Salinimicrobium

Description

Salinimicrobium sediminis is a microbial species characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in saline environments. The organism is cataloged under the accession number OCMF00000000.1, which serves as a reference for its genomic information. This species thrives in saline conditions, suggesting potential roles in biogeochemical cycles within such environments. The presence of a singular replicon may allow for efficient replication and regulation of essential genes, potentially enabling Salinimicrobium sediminis to withstand osmotic stress and utilize available resources effectively. The ecological significance of Salinimicrobium sediminis lies in its adaptation to extreme saline habitats, which may contribute to microbial diversity and functionality in such ecosystems. Understanding the genetic and physiological traits of Salinimicrobium sediminis can provide insights into microbial life in high-salinity environments, highlighting the importance of such organisms in maintaining ecological balance and nutrient cycling in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSalinimicrobium
SpeciesSalinimicrobium sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinimicrobium sediminis strain CGMCC 1.12641 genome assembly,

Gene Summary

Adenine Count

1015499 bp

Thymine Count

1014981 bp

Guanine Count

719992 bp

Cytosine Count

731817 bp

Genome Length

3482289 bp

Protein-coding Genes

3119 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lsu ribosomal protein l19pSAMN06296241_2178Not AvailablePositive2352850 - 235320013600.6
isocitrate dehydrogenaseSAMN06296241_2179Not AvailablePositive2353623 - 235595386307.9
beta-lactamase class aSAMN06296241_2180Not AvailablePositive2356061 - 235700235602.9
lysr family transcriptional regulator, hydrogen peroxide-inducible genes activatorSAMN06296241_2181Not AvailablePositive2357102 - 235804335435.5
hypothetical proteinSAMN06296241_2182Not AvailableNegative2358087 - 23582847759.7
tigr00266 family proteinSAMN06296241_2183Not AvailableNegative2358417 - 235921728291.4
protein of unknown functionSAMN06296241_2184Not AvailableNegative2359295 - 235975016746.2
hypothetical proteinSAMN06296241_2185Not AvailablePositive2359895 - 236039218299.5
transcriptional regulator, padr familySAMN06296241_2186Not AvailablePositive2360452 - 236079613029.8
phage shock protein c (pspc) family proteinSAMN06296241_2187Not AvailablePositive2360789 - 236249863985.9

Displaying genes 2161 – 2170 of 3184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.