Salinimicrobium sediminis

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Salinimicrobium

Description

Salinimicrobium sediminis is a microbial species characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in saline environments. The organism is cataloged under the accession number OCMF00000000.1, which serves as a reference for its genomic information. This species thrives in saline conditions, suggesting potential roles in biogeochemical cycles within such environments. The presence of a singular replicon may allow for efficient replication and regulation of essential genes, potentially enabling Salinimicrobium sediminis to withstand osmotic stress and utilize available resources effectively. The ecological significance of Salinimicrobium sediminis lies in its adaptation to extreme saline habitats, which may contribute to microbial diversity and functionality in such ecosystems. Understanding the genetic and physiological traits of Salinimicrobium sediminis can provide insights into microbial life in high-salinity environments, highlighting the importance of such organisms in maintaining ecological balance and nutrient cycling in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSalinimicrobium
SpeciesSalinimicrobium sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinimicrobium sediminis strain CGMCC 1.12641 genome assembly,

Gene Summary

Adenine Count

1015499 bp

Thymine Count

1014981 bp

Guanine Count

719992 bp

Cytosine Count

731817 bp

Genome Length

3482289 bp

Protein-coding Genes

3119 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
proton-dependent oligopeptide transporter, pot familySAMN06296241_1522Not AvailablePositive1624984 - 162657658323.2
proton-dependent oligopeptide transporter, pot familySAMN06296241_1523Not AvailablePositive1626576 - 162836365586.7
thioredoxin-related proteinSAMN06296241_1524Not AvailablePositive1628456 - 162900721356.4
competence protein comecSAMN06296241_1525Not AvailableNegative1629026 - 163104176128.7
nlpc/p60 family proteinSAMN06296241_1526Not AvailableNegative1631078 - 163162920845.0
lipid-a-disaccharide synthaseSAMN06296241_1527Not AvailableNegative1631626 - 163274443201.6
hypothetical proteinSAMN06296241_1528Not AvailableNegative1632745 - 163302610251.3
5'-nucleotidase /3'-nucleotidase /exopolyphosphataseSAMN06296241_1529Not AvailableNegative1633019 - 163380128678.0
carboxyl-terminal processing proteaseSAMN06296241_1530Not AvailablePositive1633948 - 163608082027.9
rod shape determining protein rodaSAMN06296241_1531Not AvailableNegative1636384 - 163763446687.5

Displaying genes 1511 – 1520 of 3184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.