Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Palaeococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Palaeococcus |
| Species | Palaeococcus pacificus |
| Strain | DY20341 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
525583 bp
Thymine Count
533435 bp
Guanine Count
405485 bp
Cytosine Count
394867 bp
Genome Length
1859370 bp
Protein-coding Genes
1976 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | PAP_RS03825 | Not Available | Positive | 660349 - 660936 | 21611.3 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | PAP_RS03830 | Not Available | Positive | 660938 - 661621 | 25490.7 |
| imidazole glycerol phosphate synthase subunit hisf | PAP_RS03835 | Not Available | Positive | 661621 - 662376 | 27457.0 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | PAP_RS03840 | Not Available | Positive | 662360 - 662992 | 24206.2 |
| histidinol-phosphate transaminase | PAP_RS03845 | Not Available | Positive | 662989 - 663996 | 38717.4 |
| had family hydrolase | PAP_RS03850 | Not Available | Positive | 664033 - 664767 | 28510.4 |
| had hydrolase family protein | PAP_RS03855 | Not Available | Negative | 664764 - 665027 | 9501.52 |
| had family hydrolase | PAP_RS03860 | Not Available | Negative | 665053 - 665346 | 11285.0 |
| abc transporter substrate-binding protein | PAP_RS03865 | Not Available | Positive | 665672 - 666967 | 47371.7 |
| abc transporter atp-binding protein | PAP_RS03870 | Not Available | Positive | 667008 - 667769 | 28310.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
