Palaeococcus pacificus DY20341

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Palaeococcus

Description

Palaeococcus pacificus DY20341 is characterized by having a single replicon, which is an important trait for understanding its genomic structure and replication processes. This bacterium is noted for its specific accession number, NZ_CP006019.1, which provides a reference point for researchers seeking to access its genomic data and further information. This unique microbial species is likely to have adapted to its environment, although specific ecological roles or habitats are not detailed in the current evidence. The single replicon suggests a streamlined genetic organization, which may contribute to its efficiency in resource utilization and adaptability to various conditions. Understanding Palaeococcus pacificus DY20341 through its genomic features can offer insights into the evolutionary biology of prokaryotes. The presence of only one replicon may indicate a simpler regulatory mechanism for gene expression and replication, which could provide advantages in certain ecological niches. As research continues, the study of Palaeococcus pacificus may enhance our knowledge of microbial diversity and the evolutionary strategies employed by extremophiles or other specialized microorganisms.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPalaeococcus
SpeciesPalaeococcus pacificus
StrainDY20341

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Palaeococcus pacificus DY20341 chromosome, complete genome.

Gene Summary

Adenine Count

525583 bp

Thymine Count

533435 bp

Guanine Count

405485 bp

Cytosine Count

394867 bp

Genome Length

1859370 bp

Protein-coding Genes

1976 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf427 domain-containing proteinPAP_RS01855Not AvailablePositive329498 - 32980011442.7
nad(p)/fad-dependent oxidoreductasePAP_RS01860Not AvailablePositive329811 - 33115149379.6
rna-guided pseudouridylation complex pseudouridine synthase subunit cbf5PAP_RS01865Not AvailablePositive331216 - 33222938157.9
class i sam-dependent methyltransferasePAP_RS10165Not AvailablePositive332788 - 33337521811.7
Trna-serNot AvailableNot AvailablePositive333361 - 333447Not Available
30s ribosomal protein s13PAP_RS01875Not AvailablePositive333489 - 33393516974.7
30s ribosomal protein s4PAP_RS01880Not AvailablePositive333946 - 33448821408.0
30s ribosomal protein s11PAP_RS01885Not AvailablePositive334485 - 33489514421.4
dna-directed rna polymerase subunit dPAP_RS01890Not AvailablePositive334920 - 33570529749.9
Trna-leuNot AvailableNot AvailablePositive335710 - 335797Not Available

Displaying genes 371 – 380 of 2031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.