Palaeococcus pacificus DY20341

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Palaeococcus

Description

Palaeococcus pacificus DY20341 is characterized by having a single replicon, which is an important trait for understanding its genomic structure and replication processes. This bacterium is noted for its specific accession number, NZ_CP006019.1, which provides a reference point for researchers seeking to access its genomic data and further information. This unique microbial species is likely to have adapted to its environment, although specific ecological roles or habitats are not detailed in the current evidence. The single replicon suggests a streamlined genetic organization, which may contribute to its efficiency in resource utilization and adaptability to various conditions. Understanding Palaeococcus pacificus DY20341 through its genomic features can offer insights into the evolutionary biology of prokaryotes. The presence of only one replicon may indicate a simpler regulatory mechanism for gene expression and replication, which could provide advantages in certain ecological niches. As research continues, the study of Palaeococcus pacificus may enhance our knowledge of microbial diversity and the evolutionary strategies employed by extremophiles or other specialized microorganisms.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPalaeococcus
SpeciesPalaeococcus pacificus
StrainDY20341

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Palaeococcus pacificus DY20341 chromosome, complete genome.

Gene Summary

Adenine Count

525583 bp

Thymine Count

533435 bp

Guanine Count

405485 bp

Cytosine Count

394867 bp

Genome Length

1859370 bp

Protein-coding Genes

1976 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vanz family proteinPAP_RS09460Not AvailableNegative1740263 - 174056211144.9
thiamine-phosphate synthase family proteinPAP_RS09465Not AvailableNegative1740559 - 174145533565.6
aspartate carbamoyltransferasePAP_RS09470Not AvailablePositive1741567 - 174249334532.8
aspartate carbamoyltransferase regulatory subunitPAP_RS09475Not AvailablePositive1742490 - 174294516741.7
d-glucuronyl c5-epimerase family proteinPAP_RS09480Not AvailablePositive1743115 - 174464158807.8
membrane proteinPAP_RS09485Not AvailableNegative1744631 - 174521821658.6
alpha-glucosidasePAP_RS09490Not AvailableNegative1745330 - 174605827194.6
sodium-dependent transporterPAP_RS09495Not AvailableNegative1746213 - 174778157990.7
glutamate dehydrogenasePAP_RS09500Not AvailableNegative1748130 - 174938946805.3
winged helix-turn-helix transcriptional regulatorPAP_RS09505Not AvailablePositive1749687 - 175021420557.1

Displaying genes 1911 – 1920 of 2031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.