Palaeococcus pacificus DY20341

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Palaeococcus

Description

Palaeococcus pacificus DY20341 is characterized by having a single replicon, which is an important trait for understanding its genomic structure and replication processes. This bacterium is noted for its specific accession number, NZ_CP006019.1, which provides a reference point for researchers seeking to access its genomic data and further information. This unique microbial species is likely to have adapted to its environment, although specific ecological roles or habitats are not detailed in the current evidence. The single replicon suggests a streamlined genetic organization, which may contribute to its efficiency in resource utilization and adaptability to various conditions. Understanding Palaeococcus pacificus DY20341 through its genomic features can offer insights into the evolutionary biology of prokaryotes. The presence of only one replicon may indicate a simpler regulatory mechanism for gene expression and replication, which could provide advantages in certain ecological niches. As research continues, the study of Palaeococcus pacificus may enhance our knowledge of microbial diversity and the evolutionary strategies employed by extremophiles or other specialized microorganisms.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPalaeococcus
SpeciesPalaeococcus pacificus
StrainDY20341

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Palaeococcus pacificus DY20341 chromosome, complete genome.

Gene Summary

Adenine Count

525583 bp

Thymine Count

533435 bp

Guanine Count

405485 bp

Cytosine Count

394867 bp

Genome Length

1859370 bp

Protein-coding Genes

1976 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron abc transporter substrate-binding proteinPAP_RS08475Not AvailableNegative1555898 - 155701640913.0
fmde family proteinPAP_RS08480Not AvailableNegative1557006 - 155767724874.2
nifb/nifx family molybdenum-iron cluster-binding proteinPAP_RS08485Not AvailablePositive1557816 - 155819013982.5
pd40 domain-containing proteinPAP_RS08490Not AvailableNegative1558233 - 156014972117.2
hypothetical proteinPAP_RS08495Not AvailablePositive1560213 - 156113634645.9
arsenate reductase arscPAP_RS08500Not AvailableNegative1561128 - 156157717264.8
acr3 family arsenite efflux transporterPAP_RS08505Not AvailablePositive1561724 - 156282440709.7
thioredoxin family proteinPAP_RS08510Not AvailableNegative1562821 - 156313212415.0
heavy metal translocating p-type atpasePAP_RS08515Not AvailableNegative1563143 - 156554887596.1
trash domain-containing proteinPAP_RS08520Not AvailablePositive1565674 - 156627623862.3

Displaying genes 1711 – 1720 of 2031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.