Palaeococcus pacificus DY20341

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Palaeococcus

Description

Palaeococcus pacificus DY20341 is characterized by having a single replicon, which is an important trait for understanding its genomic structure and replication processes. This bacterium is noted for its specific accession number, NZ_CP006019.1, which provides a reference point for researchers seeking to access its genomic data and further information. This unique microbial species is likely to have adapted to its environment, although specific ecological roles or habitats are not detailed in the current evidence. The single replicon suggests a streamlined genetic organization, which may contribute to its efficiency in resource utilization and adaptability to various conditions. Understanding Palaeococcus pacificus DY20341 through its genomic features can offer insights into the evolutionary biology of prokaryotes. The presence of only one replicon may indicate a simpler regulatory mechanism for gene expression and replication, which could provide advantages in certain ecological niches. As research continues, the study of Palaeococcus pacificus may enhance our knowledge of microbial diversity and the evolutionary strategies employed by extremophiles or other specialized microorganisms.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPalaeococcus
SpeciesPalaeococcus pacificus
StrainDY20341

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Palaeococcus pacificus DY20341 chromosome, complete genome.

Gene Summary

Adenine Count

525583 bp

Thymine Count

533435 bp

Guanine Count

405485 bp

Cytosine Count

394867 bp

Genome Length

1859370 bp

Protein-coding Genes

1976 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylaminoimidazolesuccinocarboxamide synthasePAP_RS00605Not AvailableNegative111832 - 11251826019.4
amidophosphoribosyltransferasePAP_RS00610Not AvailablePositive112689 - 11402049426.7
l-aspartate oxidasePAP_RS00615Not AvailablePositive114067 - 11546150897.3
quinolinate synthase nadaPAP_RS00620Not AvailablePositive115541 - 11644334113.6
carboxylating nicotinate-nucleotide diphosphorylasePAP_RS00625Not AvailablePositive116505 - 11733230128.9
mfs transporterPAP_RS00630Not AvailableNegative117329 - 11848041067.5
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdPAP_RS00635Not AvailablePositive118582 - 11962238758.0
riboflavin synthasePAP_RS00640Not AvailablePositive119607 - 12017621166.8
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiPAP_RS00645Not AvailablePositive120157 - 12132643956.5
6,7-dimethyl-8-ribityllumazine synthasePAP_RS00650Not AvailablePositive121323 - 12178416903.6

Displaying genes 121 – 130 of 2031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.