Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Palaeococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Palaeococcus |
| Species | Palaeococcus pacificus |
| Strain | DY20341 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
525583 bp
Thymine Count
533435 bp
Guanine Count
405485 bp
Cytosine Count
394867 bp
Genome Length
1859370 bp
Protein-coding Genes
1976 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | PAP_RS00605 | Not Available | Negative | 111832 - 112518 | 26019.4 |
| amidophosphoribosyltransferase | PAP_RS00610 | Not Available | Positive | 112689 - 114020 | 49426.7 |
| l-aspartate oxidase | PAP_RS00615 | Not Available | Positive | 114067 - 115461 | 50897.3 |
| quinolinate synthase nada | PAP_RS00620 | Not Available | Positive | 115541 - 116443 | 34113.6 |
| carboxylating nicotinate-nucleotide diphosphorylase | PAP_RS00625 | Not Available | Positive | 116505 - 117332 | 30128.9 |
| mfs transporter | PAP_RS00630 | Not Available | Negative | 117329 - 118480 | 41067.5 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | PAP_RS00635 | Not Available | Positive | 118582 - 119622 | 38758.0 |
| riboflavin synthase | PAP_RS00640 | Not Available | Positive | 119607 - 120176 | 21166.8 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | PAP_RS00645 | Not Available | Positive | 120157 - 121326 | 43956.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | PAP_RS00650 | Not Available | Positive | 121323 - 121784 | 16903.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
