Palaeococcus pacificus DY20341

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Palaeococcus

Description

Palaeococcus pacificus DY20341 is characterized by having a single replicon, which is an important trait for understanding its genomic structure and replication processes. This bacterium is noted for its specific accession number, NZ_CP006019.1, which provides a reference point for researchers seeking to access its genomic data and further information. This unique microbial species is likely to have adapted to its environment, although specific ecological roles or habitats are not detailed in the current evidence. The single replicon suggests a streamlined genetic organization, which may contribute to its efficiency in resource utilization and adaptability to various conditions. Understanding Palaeococcus pacificus DY20341 through its genomic features can offer insights into the evolutionary biology of prokaryotes. The presence of only one replicon may indicate a simpler regulatory mechanism for gene expression and replication, which could provide advantages in certain ecological niches. As research continues, the study of Palaeococcus pacificus may enhance our knowledge of microbial diversity and the evolutionary strategies employed by extremophiles or other specialized microorganisms.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPalaeococcus
SpeciesPalaeococcus pacificus
StrainDY20341

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Palaeococcus pacificus DY20341 chromosome, complete genome.

Gene Summary

Adenine Count

525583 bp

Thymine Count

533435 bp

Guanine Count

405485 bp

Cytosine Count

394867 bp

Genome Length

1859370 bp

Protein-coding Genes

1976 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hit family proteinPAP_RS04925Not AvailableNegative872937 - 87338916954.5
glycogen/starch synthasePAP_RS04930Not AvailableNegative873401 - 87477451923.6
hth-type sugar sensing transcriptional regulator trmbl1PAP_RS04935Not AvailableNegative874802 - 87582739643.3
glycoside hydrolase family 13 proteinPAP_RS04940Not AvailablePositive875910 - 87790778995.0
extracellular solute-binding proteinPAP_RS04945Not AvailablePositive878026 - 87933347820.6
carbohydrate abc transporter permeasePAP_RS04950Not AvailablePositive879379 - 88028133715.2
abc transporter permease subunitPAP_RS04955Not AvailablePositive880278 - 88162449616.3
glucodextranase domon-like domain-containing proteinPAP_RS04960Not AvailablePositive881635 - 885648151586.0
abc transporter atp-binding proteinPAP_RS04965Not AvailablePositive885682 - 88680942113.4
upf0146 family proteinPAP_RS04970Not AvailablePositive886852 - 88725015005.6

Displaying genes 991 – 1000 of 2031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.