Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Palaeococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Palaeococcus |
| Species | Palaeococcus pacificus |
| Strain | DY20341 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
525583 bp
Thymine Count
533435 bp
Guanine Count
405485 bp
Cytosine Count
394867 bp
Genome Length
1859370 bp
Protein-coding Genes
1976 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hit family protein | PAP_RS04925 | Not Available | Negative | 872937 - 873389 | 16954.5 |
| glycogen/starch synthase | PAP_RS04930 | Not Available | Negative | 873401 - 874774 | 51923.6 |
| hth-type sugar sensing transcriptional regulator trmbl1 | PAP_RS04935 | Not Available | Negative | 874802 - 875827 | 39643.3 |
| glycoside hydrolase family 13 protein | PAP_RS04940 | Not Available | Positive | 875910 - 877907 | 78995.0 |
| extracellular solute-binding protein | PAP_RS04945 | Not Available | Positive | 878026 - 879333 | 47820.6 |
| carbohydrate abc transporter permease | PAP_RS04950 | Not Available | Positive | 879379 - 880281 | 33715.2 |
| abc transporter permease subunit | PAP_RS04955 | Not Available | Positive | 880278 - 881624 | 49616.3 |
| glucodextranase domon-like domain-containing protein | PAP_RS04960 | Not Available | Positive | 881635 - 885648 | 151586.0 |
| abc transporter atp-binding protein | PAP_RS04965 | Not Available | Positive | 885682 - 886809 | 42113.4 |
| upf0146 family protein | PAP_RS04970 | Not Available | Positive | 886852 - 887250 | 15005.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
