Sulfitobacter geojensis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Sulfitobacter

Description

Sulfitobacter geojensis is a Gram-negative bacterium characterized by a single replicon. It is part of the broader group of bacteria known for their sulfur metabolism, particularly in marine environments. The organism is cataloged under the accession number LXYM00000000.1, which provides a reference for genomic information. The classification of Sulfitobacter geojensis as Gram-negative indicates that it possesses a thin peptidoglycan layer and an outer membrane, a hallmark of this group that often influences its interactions with the environment and other organisms. This structural characteristic is significant for understanding the bacterium's ecological role, particularly in sulfur cycling and its potential contributions to biogeochemical processes. In ecological terms, Sulfitobacter geojensis likely occupies a niche where sulfur compounds are prevalent, such as in coastal marine sediments or environments rich in organic matter. Its metabolic capabilities may facilitate the transformation of sulfur compounds, contributing to nutrient cycling within these ecosystems. Understanding the specific interactions and roles of Sulfitobacter geojensis can provide insights into the dynamics of microbial communities and their functions, particularly in relation to sulfur metabolism in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSulfitobacter
SpeciesSulfitobacter geojensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sulfitobacter geojensis strain EhN01 A2_Contig9, whole genome

Gene Summary

Adenine Count

905178 bp

Thymine Count

890550 bp

Guanine Count

1209043 bp

Cytosine Count

1261653 bp

Genome Length

4266442 bp

Protein-coding Genes

3972 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinA8B74_00020Not AvailableNegative1903 - 399376476.7
peptide abc transporter permeaseA8B74_00025Not AvailableNegative4087 - 554452371.3
5s ribosomal rnaNot AvailableNot AvailablePositive5964 - 6078Not Available
peptide abc transporter permeaseA8B74_00030Q53191Negative5559 - 664439703.3
arac family transcriptional regulatorA8B74_00035Not AvailableNegative6960 - 775128925.8
trna (adenosine(37)-n6)-dimethylallyltransferase miaaA8B74_00040Q166F7Negative7830 - 871131703.0
ump kinaseA8B74_00045Q166F6Positive8809 - 953726163.5
ribosome recycling factorA8B74_00050Q166F5Positive9751 - 1031421029.4
di-trans,poly-cis-decaprenylcistransferaseA8B74_00055Q8UFL9Positive10399 - 1117228925.1
phosphatidate cytidylyltransferaseA8B74_00060Q8YHH2Positive11182 - 1197628196.8

Displaying genes 21 – 30 of 4026 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

325 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da

Displaying 1–10 of 325 metabolites

Health Effects

No health effects information available for this bacterium.