Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family protein | M099_0967 | Not Available | Negative | 1036939 - 1037475 | 21672.0 |
| hypothetical protein | M099_0968 | Not Available | Negative | 1037679 - 1037804 | 4960.31 |
| smpa / omla family protein | M099_0969 | Not Available | Positive | 1037867 - 1038454 | 22411.9 |
| hypothetical protein | M099_0970 | Not Available | Positive | 1038488 - 1039099 | 22961.6 |
| hypothetical protein | M099_0971 | Not Available | Negative | 1039169 - 1039492 | 11453.6 |
| cytidine and deoxycytidylate deaminase zinc-binding region family protein | M099_0972 | Not Available | Positive | 1039711 - 1040190 | 17702.2 |
| hypothetical protein | M099_0973 | Not Available | Positive | 1040187 - 1041239 | 40541.8 |
| gdsl-like lipase/acylhydrolase family protein | M099_0974 | Not Available | Negative | 1041306 - 1042817 | 57342.3 |
| abc transporter family protein | M099_0975 | Not Available | Negative | 1043007 - 1044563 | 58911.1 |
| grpe family protein | M099_0976 | Not Available | Positive | 1044843 - 1045424 | 21930.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

