Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsx-like permease family protein | M099_0957 | Not Available | Negative | 1026666 - 1027916 | 48018.8 |
| ftsx-like permease family protein | M099_0958 | Not Available | Negative | 1027948 - 1029240 | 47604.7 |
| abc transporter family protein | M099_0959 | Not Available | Negative | 1029284 - 1029949 | 24564.0 |
| ftsx-like permease family protein | M099_0960 | Not Available | Negative | 1030068 - 1031348 | 49246.8 |
| ftsx-like permease family protein | M099_0961 | Not Available | Negative | 1031363 - 1032664 | 49433.1 |
| hlyd secretion family protein | M099_0962 | Not Available | Negative | 1032791 - 1034038 | 46481.9 |
| mannosyl-glycoendo-beta-n-acetylglucosaminidase family protein | M099_0963 | Not Available | Negative | 1034200 - 1035033 | 32706.4 |
| hypothetical protein | M099_0964 | Not Available | Negative | 1035202 - 1035843 | 24576.1 |
| hypothetical protein | M099_0965 | Not Available | Negative | 1035999 - 1036523 | 20427.0 |
| hypothetical protein | M099_0966 | Not Available | Negative | 1036569 - 1036931 | 13705.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

