Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0947 | Not Available | Negative | 1015168 - 1015284 | 4367.42 |
| hypothetical protein | M099_0948 | Not Available | Negative | 1015327 - 1016889 | 60445.6 |
| hypothetical protein | M099_0949 | Not Available | Negative | 1017012 - 1017131 | 4709.9 |
| hamp domain protein | M099_0950 | Not Available | Negative | 1017137 - 1018432 | 49040.2 |
| bacterial regulatory, fis family protein | M099_0951 | Not Available | Negative | 1018455 - 1019810 | 50708.5 |
| outer membrane efflux family protein | M099_0952 | Not Available | Negative | 1019896 - 1021380 | 56980.8 |
| ftsx-like permease family protein | M099_0953 | Not Available | Negative | 1021534 - 1022778 | 47829.8 |
| ftsx-like permease family protein | M099_0954 | Not Available | Negative | 1022792 - 1024048 | 47308.6 |
| ftsx-like permease family protein | M099_0955 | Not Available | Negative | 1024071 - 1025342 | 48154.1 |
| ftsx-like permease family protein | M099_0956 | Not Available | Negative | 1025346 - 1026626 | 47780.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

