Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric uptake regulator family protein | M099_0927 | Not Available | Negative | 997569 - 997979 | 15560.8 |
| nad+ synthetase | M099_0928 | Not Available | Positive | 998144 - 1000069 | 71124.6 |
| histidinol-phosphatase | M099_0929 | Not Available | Negative | 1000159 - 1001277 | 42193.7 |
| histidinol-phosphate transaminase | M099_0930 | Not Available | Negative | 1001281 - 1002321 | 39640.4 |
| histidinol dehydrogenase | M099_0931 | Not Available | Negative | 1002324 - 1003604 | 46544.2 |
| atp phosphoribosyltransferase | M099_0932 | Not Available | Negative | 1003654 - 1004505 | 31336.4 |
| thioesterase superfamily protein | M099_0933 | Not Available | Negative | 1004734 - 1005225 | 18785.7 |
| stress responsive a/b barrel domain protein | M099_0934 | Not Available | Negative | 1005236 - 1005535 | 11090.4 |
| uridine kinase | M099_0935 | Not Available | Positive | 1005641 - 1006252 | 23271.3 |
| bacterial extracellular solute-binding s, 3 family protein | M099_0936 | Not Available | Positive | 1006249 - 1007628 | 52063.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

