Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide diphosphorylase | M099_0917 | Not Available | Negative | 989106 - 989957 | 31273.2 |
| putative spout methyltransferase family protein | M099_0918 | Not Available | Positive | 990038 - 990511 | 18383.5 |
| endonuclease/exonuclease/phosphatase family protein | M099_0919 | Not Available | Negative | 990588 - 991598 | 38219.7 |
| xaa-his dipeptidase family protein | M099_0920 | Not Available | Negative | 991604 - 993061 | 53122.6 |
| hypothetical protein | M099_0921 | Not Available | Positive | 993283 - 993510 | 8190.17 |
| outer membrane family protein | M099_0922 | Not Available | Positive | 993533 - 994147 | 23085.3 |
| transposase dde domain protein | M099_0923 | Not Available | Positive | 995101 - 995901 | 31375.9 |
| thioredoxin | M099_0924 | Not Available | Positive | 996078 - 996374 | 11304.9 |
| thioredoxin | M099_0925 | Not Available | Positive | 996489 - 996836 | 12995.9 |
| reverse rubrerythrin-1 | M099_0926 | Not Available | Negative | 996940 - 997491 | 20566.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

