Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide pyruvyl transferase family protein | M099_0897 | Not Available | Negative | 961986 - 963101 | 42741.6 |
| 4fe-4s binding domain protein | M099_0898 | Not Available | Negative | 963098 - 964213 | 42669.1 |
| o-antigen ligase family protein | M099_0899 | Not Available | Negative | 964218 - 965372 | 44338.1 |
| putative membrane protein | M099_0900 | Not Available | Negative | 965459 - 967000 | 57487.5 |
| capsular exopolysaccharide family domain protein | M099_0901 | Not Available | Negative | 967200 - 969614 | 90015.0 |
| polysaccharide biosynthesis/export family protein | M099_0902 | Not Available | Negative | 969652 - 970452 | 29370.8 |
| hypothetical protein | M099_0903 | Not Available | Negative | 970478 - 970912 | 16620.7 |
| transcription termination factor nusg family protein | M099_0904 | Not Available | Negative | 970930 - 971580 | 24605.0 |
| phage integrase family protein | M099_0905 | Not Available | Negative | 971876 - 972811 | 36310.9 |
| chaperone protein dnak | M099_0906 | Not Available | Negative | 973038 - 974951 | 68301.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

