Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase conserved c-terminal domain protein | M099_0877 | Not Available | Negative | 942160 - 944439 | 86586.4 |
| hypothetical protein | M099_0878 | Not Available | Negative | 944495 - 944962 | 16988.2 |
| vire n-terminal domain protein | M099_0879 | Not Available | Positive | 945148 - 945717 | 21603.9 |
| primase c terminal 2 family protein | M099_0880 | Not Available | Positive | 945721 - 947664 | 71675.4 |
| hypothetical protein | M099_0881 | Not Available | Positive | 947682 - 947906 | 8370.25 |
| hypothetical protein | M099_0882 | Not Available | Positive | 948210 - 948755 | 19301.8 |
| hypothetical protein | M099_0883 | Not Available | Positive | 948880 - 949002 | 4269.24 |
| n-acetylmuramoyl-l-alanine amidase family protein | M099_0884 | Not Available | Positive | 949060 - 949557 | 18856.7 |
| transposase is66 family protein | M099_0885 | Not Available | Negative | 950024 - 951778 | 67766.2 |
| putative transposase | M099_0886 | Not Available | Negative | 951890 - 952225 | 13381.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

